RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CD52P31358 61 aa18.26■□□□□ 0.51
CKS1B-202ENST00000368436 CTNNB1P35222 781 aa18.26■□□□□ 0.51
CKS1B-202ENST00000368436 PFKFB3Q16875 520 aaPredicted RBP18.26■□□□□ 0.51
CKS1B-202ENST00000368436 PUS10Q3MIT2 529 aaKnown RBP18.26■□□□□ 0.51
CKS1B-202ENST00000368436 FAM178BQ8IXR5 827 aa18.26■□□□□ 0.51
CKS1B-202ENST00000368436 NME8Q8N427 588 aa18.26■□□□□ 0.51
CKS1B-202ENST00000368436 TRAPPC12Q8WVT3 735 aa18.26■□□□□ 0.51
CKS1B-202ENST00000368436 CRYGNQ8WXF5 182 aa18.26■□□□□ 0.51
CKS1B-202ENST00000368436 PABPC5Q96DU9 382 aaKnown RBP18.26■□□□□ 0.51
CKS1B-202ENST00000368436 FTHL17Q9BXU8 183 aa18.26■□□□□ 0.51
CKS1B-202ENST00000368436 LMAN2LQ9H0V9 348 aa18.26■□□□□ 0.51
CKS1B-202ENST00000368436 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 KDM3AQ9Y4C1 1321 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 MYH9P35579 1960 aaKnown RBP18.25■□□□□ 0.51
CKS1B-202ENST00000368436 SMIM35A0A1B0GVV1 85 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 POTEB3A0JP26 581 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 GRXCR2A6NFK2 248 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 CCNE2O96020 404 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 CYP3A4P08684 503 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 ADD1P35611 737 aaKnown RBP18.25■□□□□ 0.51
CKS1B-202ENST00000368436 PTCRAQ6ISU1 281 aaPredicted RBP18.25■□□□□ 0.51
CKS1B-202ENST00000368436 POTEBQ6S5H4 581 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 MTHFD1LQ6UB35 978 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 ABHD15Q6UXT9 468 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 C11orf84Q9BUA3 381 aaPredicted RBP18.25■□□□□ 0.51
CKS1B-202ENST00000368436 CELF4Q9BZC1 486 aaKnown RBP18.25■□□□□ 0.51
CKS1B-202ENST00000368436 EVPLQ92817 2033 aa18.25■□□□□ 0.51
CKS1B-202ENST00000368436 WDR81Q562E7 1941 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 IGLV3-22A0A075B6J6 115 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 ESYT2A0FGR8 921 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 FAM86B1E9PN63 330 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 PI4K2BG5E9Z4 385 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 M0QZ92 97 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 GRM6O15303 877 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 DHX15O43143 795 aaKnown RBP18.24■□□□□ 0.51
CKS1B-202ENST00000368436 FAM86B2P0C5J1 330 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 IL9P15248 144 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 ZNF76P36508 570 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 TMEM62Q0P6H9 643 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 BTG3Q14201 252 aaPredicted RBP18.24■□□□□ 0.51
CKS1B-202ENST00000368436 LRFN3Q9BTN0 628 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 PADI3Q9ULW8 664 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 MYO7AQ13402 2215 aa18.24■□□□□ 0.51
CKS1B-202ENST00000368436 COL1A2P08123 1366 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 NID2Q14112 1375 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 CCDC196A0A1B0GTZ2 297 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 NCK2O43639 380 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 HBP1O60381 514 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 SCG2P13521 617 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 CPA1P15085 419 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 KLRC1P26715 233 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 METAP2P50579 478 aaKnown RBP eCLIP18.23■□□□□ 0.51
CKS1B-202ENST00000368436 JAKMIP3Q5VZ66 844 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 FAM160B1Q5W0V3 765 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 MCTP2Q6DN12 878 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 FAM43BQ6ZT52 329 aaPredicted RBP18.23■□□□□ 0.51
CKS1B-202ENST00000368436 PLA2G4DQ86XP0 818 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 NPAS4Q8IUM7 802 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 CMTR2Q8IYT2 770 aaKnown RBP18.23■□□□□ 0.51
CKS1B-202ENST00000368436 GJD3Q8N144 294 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 FBXL16Q8N461 479 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 ATP8B4Q8TF62 1192 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 PLVAPQ9BX97 442 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 ZMYND12Q9H0C1 365 aa18.23■□□□□ 0.51
CKS1B-202ENST00000368436 H3BQ06 376 aaPredicted RBP18.22■□□□□ 0.51
CKS1B-202ENST00000368436 DDX39AO00148 427 aaKnown RBP18.22■□□□□ 0.51
CKS1B-202ENST00000368436 ADAMTS3O15072 1205 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 GPR37L1O60883 481 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 KRT76Q01546 638 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 PAK2Q13177 524 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 PKN1Q16512 942 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 CTC1Q2NKJ3 1217 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 Q6ZUG5 572 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 CCDC60Q8IWA6 550 aaPredicted RBP18.22■□□□□ 0.51
CKS1B-202ENST00000368436 P2RX5Q93086 422 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 TMX1Q9H3N1 280 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 C11orf16Q9NQ32 467 aa18.22■□□□□ 0.51
CKS1B-202ENST00000368436 IPO5O00410 1097 aaKnown RBP18.21■□□□□ 0.51
CKS1B-202ENST00000368436 BACH1O14867 736 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 PRPF3O43395 683 aaKnown RBP18.21■□□□□ 0.51
CKS1B-202ENST00000368436 MMP1P03956 469 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 ATP4AP20648 1035 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 HSPA4P34932 840 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 LTBRP36941 435 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 FGD1P98174 961 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 NAALADL2Q58DX5 795 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 ZNF484Q5JVG2 852 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 TMEM31Q5JXX7 168 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 KIAA0319LQ8IZA0 1049 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 C6orf50Q9HD87 102 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 ZNF302Q9NR11 478 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 NAP1L2Q9ULW6 460 aaPredicted RBP18.21■□□□□ 0.51
CKS1B-202ENST00000368436 PLAGL2Q9UPG8 496 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 SNX14Q9Y5W7 946 aa18.21■□□□□ 0.51
CKS1B-202ENST00000368436 MRPL42Q9Y6G3 142 aaKnown RBP18.21■□□□□ 0.51
CKS1B-202ENST00000368436 FNDC1Q4ZHG4 1894 aaPredicted RBP18.2■□□□□ 0.5
CKS1B-202ENST00000368436 ZBTB42B2RXF5 422 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 STAG3L1P0CL83 205 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 HYAL1Q12794 435 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms