RNA–Protein interactions for RNA: ENST00000367311.4

PHLDA3-202, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHLDA3, Length 2,640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-202ENST00000367311 DCAF17Q5H9S7 520 aaPredicted RBP21.89■■□□□ 1.09
PHLDA3-202ENST00000367311 TRIM51Q9BSJ1 452 aa21.89■■□□□ 1.09
PHLDA3-202ENST00000367311 RIC8AQ9NPQ8 531 aa21.89■■□□□ 1.09
PHLDA3-202ENST00000367311 SLC12A6Q9UHW9 1150 aa21.89■■□□□ 1.09
PHLDA3-202ENST00000367311 TMEM59LQ9UK28 342 aa21.89■■□□□ 1.09
PHLDA3-202ENST00000367311 CLSTN1O94985 981 aa21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 BYSLQ13895 437 aaKnown RBP21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 CACNA2D3Q8IZS8 1091 aa21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 TBC1D31Q96DN5 1066 aa21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 LZTS2Q9BRK4 669 aa21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 RTFDC1Q9BY42 306 aaPredicted RBP21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 ISCUQ9H1K1 167 aa21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 BAG3O95817 575 aa21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 BRD2P25440 801 aaKnown RBP21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 XRCC4Q13426 336 aa21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 ACCSLQ4AC99 568 aa21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 UBAP2Q5T6F2 1119 aaKnown RBP21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 IRF2BP2Q7Z5L9 587 aa21.88■■□□□ 1.09
PHLDA3-202ENST00000367311 CCDC88AQ3V6T2 1871 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 KRIT1O00522 736 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 MAGOHP61326 146 aaKnown RBP21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 SPTY2D1Q68D10 685 aaPredicted RBP21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 MAGOHBQ96A72 148 aaKnown RBP21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 SPAG5Q96R06 1193 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 RNF14Q9UBS8 474 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 PCDHA2Q9Y5H9 948 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 POTEFA5A3E0 1075 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 POTEIP0CG38 1075 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 NR2F2P24468 414 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 PSMC6P62333 389 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 IFFO1Q0D2I5 559 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 TCERG1LQ5VWI1 586 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 POTEGQ6S5H5 508 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 POTEEQ6S8J3 1075 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 C3orf20Q8ND61 904 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 NEDD1Q8NHV4 660 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 KCTD10Q9H3F6 313 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 PLCB1Q9NQ66 1216 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 EMILIN3Q9NT22 766 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 HDAC9Q9UKV0 1011 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 ROBO3Q96MS0 1386 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 ROBO1Q9Y6N7 1651 aa21.87■■□□□ 1.09
PHLDA3-202ENST00000367311 ABCB11O95342 1321 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 SMIM23A6NLE4 172 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 USP17L15C9J2P7 530 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 USP17L13C9JLJ4 530 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 USP17L11C9JVI0 530 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 USP17L18D6R9N7 530 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 USP17L22D6RA61 530 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 USP17L17D6RBQ6 530 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 USP17L19D6RCP7 530 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 USP17L20D6RJB6 530 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 MGRN1O60291 552 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 KRT18P05783 430 aaKnown RBP21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 PLA2G4BP0C869 781 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 TAL1P17542 331 aaPredicted RBP21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 TM4SF1P30408 202 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 USP17L24Q0WX57 530 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 USP17L6PQ6QN14 398 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 HVCN1Q96D96 273 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 ANKRD2Q9GZV1 360 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 IRS2Q9Y4H2 1338 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 LAMB2P55268 1798 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 C16orf86Q6ZW13 317 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 SCFD2Q8WU76 684 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 RAPGEF5Q92565 580 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 SETDB2Q96T68 719 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 OSGEPQ9NPF4 335 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 BAIAP2L1Q9UHR4 511 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 PCDHA12Q9UN75 941 aa21.86■■□□□ 1.09
PHLDA3-202ENST00000367311 RFC4P35249 363 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 LACTB2Q53H82 288 aaPredicted RBP21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 ALKBH5Q6P6C2 394 aaKnown RBP21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 SLC30A10Q6XR72 485 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 KCTD1Q719H9 257 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 LRRC57Q8N9N7 239 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 AIPL1Q9NZN9 384 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 NAGPAQ9UK23 515 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 UCHL3P15374 230 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 CASP4P49662 377 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 USP11P51784 963 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 CCNHP51946 323 aaPredicted RBP21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 KCNA1Q09470 495 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 ARSHQ5FYA8 562 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 MSL1Q68DK7 614 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 CLEC4GQ6UXB4 293 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 PROM2Q8N271 834 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 UHMK1Q8TAS1 419 aaKnown RBP21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 EDEM3Q9BZQ6 932 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 RIOX1Q9H6W3 641 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 NOD2Q9HC29 1040 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 BCS1LQ9Y276 419 aa21.85■■□□□ 1.09
PHLDA3-202ENST00000367311 CLIC2O15247 247 aa21.84■■□□□ 1.09
PHLDA3-202ENST00000367311 MED24O75448 989 aa21.84■■□□□ 1.09
PHLDA3-202ENST00000367311 ATP6V1G2O95670 118 aa21.84■■□□□ 1.09
PHLDA3-202ENST00000367311 AKR1B1P15121 316 aa21.84■■□□□ 1.09
PHLDA3-202ENST00000367311 ELF3P78545 371 aaPredicted RBP21.84■■□□□ 1.09
PHLDA3-202ENST00000367311 PRPF4BQ13523 1007 aaKnown RBP21.84■■□□□ 1.09
PHLDA3-202ENST00000367311 RAB34Q9BZG1 259 aa21.84■■□□□ 1.09
PHLDA3-202ENST00000367311 LUC7LQ9NQ29 371 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms