RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 Q8N1Y9 231 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 SH2D3CQ8N5H7 860 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 PHC3Q8NDX5 983 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 LINC00476Q8WZB0 136 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 ATG4CQ96DT6 458 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 MYEOVQ96EZ4 313 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZNF48Q96MX3 618 aaPredicted RBP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 MMP19Q99542 508 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 NOC4LQ9BVI4 516 aaKnown RBP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 KIAA1683Q9H0B3 1180 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 GBP3Q9H0R5 595 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 AGO3Q9H9G7 860 aaKnown RBP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 SEMA4GQ9NTN9 838 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 SYBUQ9NX95 663 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 MTMR4Q9NYA4 1195 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 TLR6Q9Y2C9 796 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZKSCAN5Q9Y2L8 839 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 SH3BP1Q9Y3L3 701 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 NUB1Q9Y5A7 615 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 PCDHB14Q9Y5E9 798 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 XDHP47989 1333 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 CENPVL1A0A0U1RR11 272 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 KLRG2A4D1S0 409 aaPredicted RBP0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 EME2A4GXA9 379 aaPredicted RBP0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 MYMKA6NI61 221 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 PRSS44E7EML9 344 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 KRIT1O00522 736 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 TREHO43280 583 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 MFAP3LO75121 409 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 DGKIO75912 1065 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 CELA2AP08217 269 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 CKBP12277 381 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 NME1P15531 152 aaKnown RBP0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 FPR2P25090 351 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 GRB10Q13322 594 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 PWP1Q13610 501 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 WDR72Q3MJ13 1102 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 DCAF15Q66K64 600 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 SLC9A4Q6AI14 798 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 AWAT2Q6E213 333 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 IQCEQ6IPM2 695 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 MFSD5Q6N075 450 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 C11orf87Q6NUJ2 197 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 MEPCEQ7L2J0 689 aaKnown RBP0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 BMP8AQ7Z5Y6 402 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 PROSER1Q86XN7 944 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 ARHGEF19Q8IW93 802 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 SPEM1Q8N4L4 309 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 OR14K1Q8NGZ2 314 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 CPT1CQ8TCG5 803 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 ATXN2LQ8WWM7 1075 aaKnown RBP0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 NR4A3Q92570 626 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 LPPQ93052 612 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 RPL36ALQ969Q0 106 aaKnown RBP0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 TMEM169Q96HH4 297 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 MNTQ99583 582 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 TACO1Q9BSH4 297 aaKnown RBP0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 SLC46A2Q9BY10 475 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 WDR11Q9BZH6 1224 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZDHHC5Q9C0B5 715 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 SMOC1Q9H4F8 434 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 EPB41L1Q9H4G0 881 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 NRIP3Q9NQ35 241 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 CLEC1BQ9P126 229 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 WHRNQ9P202 907 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 SORCS3Q9UPU3 1222 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 WASF3Q9UPY6 502 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 ICKQ9UPZ9 632 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 TIMM13Q9Y5L4 95 aaPredicted RBP0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 EPN1Q9Y6I3 576 aaPredicted RBP0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 ROBO2Q9HCK4 1378 aa0.79□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZNF839A8K0R7 811 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 MEIS3P2A8K0S8 358 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 C9IYK1 514 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 H7BY64 318 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 TADA3O75528 432 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 SCAF4O95104 1147 aaKnown RBP0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 EYA4O95677 639 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 ESRRBO95718 433 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 PF4P02776 101 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 MRE11P49959 708 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 ST13P50502 369 aaKnown RBP0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 KCNQ1P51787 676 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 RABGGTBP53611 331 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 MXRA7P84157 204 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 PFKPQ01813 784 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 ADCY1Q08828 1119 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 LAMB3Q13751 1172 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 DSC3Q14574 896 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 TBR1Q16650 682 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 DPY19L1Q2PZI1 675 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 KRTAP13-3Q3SY46 172 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 DCAF17Q5H9S7 520 aaPredicted RBP0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 MTX3Q5HYI7 312 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 ABHD17BQ5VST6 288 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 TDRD10Q5VZ19 366 aaKnown RBP0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 BSPRYQ5W0U4 402 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 NAIF1Q69YI7 327 aaPredicted RBP0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 IQSEC1Q6DN90 963 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms