RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 KRT76Q01546 638 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 CSTF3Q12996 717 aaKnown RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 FBXO18Q8NFZ0 1043 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 PRPSAP2O60256 369 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 ARHGEF25Q86VW2 580 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 CALR3Q96L12 384 aaKnown RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 GTPBP6O43824 516 aaPredicted RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 PRKG1Q13976 671 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 ARMCX5Q6P1M9 558 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 IKBIPQ70UQ0 350 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 ELAC2Q9BQ52 826 aaKnown RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 ZNF839A8K0R7 811 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 BBS9Q3SYG4 887 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 CUEDC2Q9H467 287 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 NOVA2Q9UNW9 492 aaKnown RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 SSH2Q76I76 1423 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 ZNF644Q9H582 1327 aaPredicted RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 KIF21AQ7Z4S6 1674 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 CASP14P31944 242 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 XAGE3Q8WTP9 111 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 AURKCQ9UQB9 309 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 FAM32AQ9Y421 112 aaKnown RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 OLFM1Q99784 485 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 CALN1Q9BXU9 219 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 ARL2BPQ9Y2Y0 163 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 MXD4Q14582 209 aaPredicted RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 FNDC3AQ9Y2H6 1198 aaKnown RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 V9GY48 417 aaPredicted RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 PODXLO00592 558 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 ATXN8OSP0DMR3 200 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 DMAP1Q9NPF5 467 aaPredicted RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 GINM1Q9NU53 330 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 ITGB1BP2Q9UKP3 347 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 KRT26Q7Z3Y9 468 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 UVRAGQ9P2Y5 699 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 POLGP54098 1239 aaPredicted RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 RBBP7Q16576 425 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 TUBGCP2Q9BSJ2 902 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 NCOA5Q9HCD5 579 aaKnown RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 HNRNPDLO14979 420 aaKnown RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 ALKBH8Q96BT7 664 aaKnown RBP8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 MAP3K15Q6ZN16 1313 aa8.98□□□□□ -0.97
NCKAP1-202ENST00000361354 NARS2Q96I59 477 aaKnown RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 HSPA2P54652 639 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 MKRN3Q13064 507 aaKnown RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 ADCK5Q3MIX3 580 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 RDH13Q8NBN7 331 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 CNOT6LQ96LI5 555 aaKnown RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 H7C0S8 307 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 CLCN6P51797 869 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 RBM6P78332 1123 aaKnown RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 TNIP2Q8NFZ5 429 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 GCNAQ96QF7 691 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 RSPH10B2B2RC85 870 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 ENC1O14682 589 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 RSPH10BP0C881 870 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 ANKS3Q6ZW76 656 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 FAM149B1Q96BN6 582 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 FTOQ9C0B1 505 aaKnown RBP eCLIP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 EME1Q96AY2 570 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 MTERF3Q96E29 417 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 NIP7Q9Y221 180 aaKnown RBP eCLIP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 C11orf88Q6PI97 169 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 KSR2Q6VAB6 950 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 MAGEB5Q9BZ81 275 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 PIGUQ9H490 435 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 ABCC12Q96J65 1359 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 SYNDIG1LA6NDD5 238 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 TRIM49P0CI25 452 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 TRIM49CP0CI26 452 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 DDHD1Q8NEL9 900 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 AIPL1Q9NZN9 384 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 FAM107AO95990 144 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 DZIP3Q86Y13 1208 aaKnown RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 BRD1O95696 1058 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 ARMCX4Q5H9R4 360 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 PCDHGB4Q9UN71 923 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 ARID1BQ8NFD5 2236 aaPredicted RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 CCDC22O60826 627 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 FOSL2P15408 326 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 ATXN3P54252 364 aaPredicted RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 ADAM9Q13443 819 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 ETNK1Q9HBU6 452 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 FAM170AA1A519 330 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 MRPS35P82673 323 aaKnown RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 LMBR1LQ6UX01 489 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 EXOC8Q8IYI6 725 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 KLC4Q9NSK0 619 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 KITP10721 976 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 TRIM25Q14258 630 aaKnown RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 ARHGEF16Q5VV41 709 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 OLFML3Q9NRN5 406 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 MAGED2Q9UNF1 606 aaPredicted RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 E5RI56 91 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 LARP4BQ92615 738 aaKnown RBP8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 C5orf58C9J3I9 102 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 SARM1Q6SZW1 724 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 MLH1P40692 756 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 TBC1D9BQ66K14 1250 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 EPS8L2Q9H6S3 715 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms