RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 RPS12P25398 132 aaKnown RBP24.88■■□□□ 1.57
LDB1-201ENST00000361198 SETQ01105 290 aaPredicted RBP24.88■■□□□ 1.57
LDB1-201ENST00000361198 MICALL2Q8IY33 904 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 CPXCR1Q8N123 301 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 CLEC4DQ8WXI8 215 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 LPAR1Q92633 364 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 KIAA1683Q9H0B3 1180 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 PSD3Q9NYI0 1048 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 WRAP73Q9P2S5 460 aaPredicted RBP24.88■■□□□ 1.57
LDB1-201ENST00000361198 GPS2Q13227 327 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 CACNA2D4Q7Z3S7 1137 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 TXLNBQ8N3L3 684 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 MXRA8Q9BRK3 442 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 SAR1BQ9Y6B6 198 aa24.88■■□□□ 1.57
LDB1-201ENST00000361198 IPO5O00410 1097 aaKnown RBP24.87■■□□□ 1.57
LDB1-201ENST00000361198 NOL4O94818 638 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 ITGB5P18084 799 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 GMPSP49915 693 aaPredicted RBP24.87■■□□□ 1.57
LDB1-201ENST00000361198 TBC1D10BQ4KMP7 808 aaPredicted RBP24.87■■□□□ 1.57
LDB1-201ENST00000361198 B3GNT9Q6UX72 402 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 C1orf186Q6ZWK4 172 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 EXOC4Q96A65 974 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 CRACR2AQ9BSW2 395 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 WDR11Q9BZH6 1224 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 EDEM3Q9BZQ6 932 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 DUSP10Q9Y6W6 482 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 PDXKO00764 312 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 CTNND1O60716 968 aaKnown RBP24.87■■□□□ 1.57
LDB1-201ENST00000361198 GCNT3O95395 438 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 KCNA1Q09470 495 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 PDXDC1Q6P996 788 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 PURBQ96QR8 312 aaKnown RBP24.87■■□□□ 1.57
LDB1-201ENST00000361198 NLRC4Q9NPP4 1024 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 HACL1Q9UJ83 578 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 ADAM21Q9UKJ8 722 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 BCS1LQ9Y276 419 aa24.87■■□□□ 1.57
LDB1-201ENST00000361198 ATP1A1P05023 1023 aaKnown RBP24.86■■□□□ 1.57
LDB1-201ENST00000361198 EIF4A3P38919 411 aaKnown RBP24.86■■□□□ 1.57
LDB1-201ENST00000361198 BMT2Q1RMZ1 405 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 RAVER2Q9HCJ3 691 aaKnown RBP24.86■■□□□ 1.57
LDB1-201ENST00000361198 PDE11AQ9HCR9 933 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 OLFML3Q9NRN5 406 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 FAM184BQ9ULE4 1060 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 ENC1O14682 589 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 EIF3JO75822 258 aaKnown RBP24.86■■□□□ 1.57
LDB1-201ENST00000361198 ALAS1P13196 640 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 KIF11P52732 1056 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 VAV2P52735 878 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 IL31RAQ8NI17 732 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 RPGRIP1Q96KN7 1286 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 LSM14BQ9BX40 385 aaKnown RBP24.86■■□□□ 1.57
LDB1-201ENST00000361198 TEKT3Q9BXF9 490 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 MTFR1LQ9H019 292 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 SUGCTQ9HAC7 445 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 GJA3Q9Y6H8 435 aa24.86■■□□□ 1.57
LDB1-201ENST00000361198 RPTORQ8N122 1335 aa24.85■■□□□ 1.57
LDB1-201ENST00000361198 APBA1Q02410 837 aa24.85■■□□□ 1.57
LDB1-201ENST00000361198 KCNH2Q12809 1159 aa24.85■■□□□ 1.57
LDB1-201ENST00000361198 EPHA7Q15375 998 aa24.85■■□□□ 1.57
LDB1-201ENST00000361198 SPA17Q15506 151 aa24.85■■□□□ 1.57
LDB1-201ENST00000361198 SLC38A10Q9HBR0 1119 aa24.85■■□□□ 1.57
LDB1-201ENST00000361198 HOMER2Q9NSB8 354 aa24.85■■□□□ 1.57
LDB1-201ENST00000361198 CEP72Q9P209 647 aa24.85■■□□□ 1.57
LDB1-201ENST00000361198 HDAC6Q9UBN7 1215 aa24.85■■□□□ 1.57
LDB1-201ENST00000361198 CNOT7Q9UIV1 285 aaKnown RBP24.85■■□□□ 1.57
LDB1-201ENST00000361198 ASTN1O14525 1302 aa24.85■■□□□ 1.57
LDB1-201ENST00000361198 ANO9A1A5B4 782 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 CALUO43852 315 aaPredicted RBP24.84■■□□□ 1.57
LDB1-201ENST00000361198 USP14P54578 494 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 RASSF7Q02833 373 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 CASP8Q14790 479 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 NBPF12Q5TAG4 269 aaPredicted RBP24.84■■□□□ 1.57
LDB1-201ENST00000361198 TYW1Q9NV66 732 aaKnown RBP24.84■■□□□ 1.57
LDB1-201ENST00000361198 DDX39AO00148 427 aaKnown RBP24.84■■□□□ 1.57
LDB1-201ENST00000361198 FLOT1O75955 427 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 FAM13AO94988 1023 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 GAP43P17677 238 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 MTMR2Q13614 643 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 MUM1L1Q5H9M0 696 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 MYCT1Q8N699 235 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 NACC1Q96RE7 527 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 DEF6Q9H4E7 631 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 KCNH7Q9NS40 1196 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 PKD2L1Q9P0L9 805 aa24.84■■□□□ 1.57
LDB1-201ENST00000361198 LCA5LO95447 670 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 VCAM1P19320 739 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 MUTP22033 750 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 KIF5AQ12840 1032 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 ARHGAP27Q6ZUM4 889 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 FRMD5Q7Z6J6 570 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 RIT2Q99578 217 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 LXNQ9BS40 222 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 AKAP3O75969 853 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 NMT1P30419 496 aaKnown RBP24.83■■□□□ 1.57
LDB1-201ENST00000361198 HNRNPH2P55795 449 aaKnown RBP24.83■■□□□ 1.57
LDB1-201ENST00000361198 POLR2FP61218 127 aaKnown RBP24.83■■□□□ 1.57
LDB1-201ENST00000361198 HGSNATQ68CP4 663 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 MCF2L2Q86YR7 1114 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 BANK1Q8NDB2 785 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 MMS19Q96T76 1030 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms