RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PLBD2Q8NHP8 589 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 DCPSQ96C86 337 aaKnown RBP14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 TRIM8Q9BZR9 551 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 C10orf88Q9H8K7 445 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 ZNF408Q9H9D4 720 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 STMN3Q9NZ72 180 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 RASA4BC9J798 803 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 RASA4O43374 803 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 IFRD2Q12894 506 aaPredicted RBP14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 RFX8Q6ZV50 586 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 PRR23D1E9PI22 279 aaPredicted RBP14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 HSPA4LO95757 839 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 PRR23D2P0DMB1 279 aaPredicted RBP14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 PPP2R2AP63151 447 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 TRIP13Q15645 432 aaPredicted RBP14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 CPXCR1Q8N123 301 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 CATSPER1Q8NEC5 780 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 SLC26A7Q8TE54 656 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 SLC7A3Q8WY07 619 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 BLVRAP53004 296 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 CTDSPL2Q05D32 466 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 NR1H3Q13133 447 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 CYTH1Q15438 398 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 CEP78Q5JTW2 689 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 C11orf57Q6ZUT1 292 aaPredicted RBP14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 PSTPIP2Q9H939 334 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 RAPGEF6Q8TEU7 1601 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 PYROXD1Q8WU10 500 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 TGS1Q96RS0 853 aaKnown RBP14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 E7EWF7 191 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 AFPP02771 609 aaKnown RBP14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 SERPINB3P29508 390 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 DPCR1Q3MIW9 517 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 TADA1Q96BN2 335 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 CLIC6Q96NY7 704 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 JAG2Q9Y219 1238 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 PLB1Q6P1J6 1458 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 BTNL9Q6UXG8 535 aa14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 MAGED2Q9UNF1 606 aaPredicted RBP14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
SRGAP3-201ENST00000360413 IKBKBO14920 756 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 ANGPTL8Q6UXH0 198 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 TLK2Q86UE8 772 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 PCDHA13Q9Y5I0 950 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 TESPA1A2RU30 521 aaPredicted RBP14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 S100A5P33763 92 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 NNMTP40261 264 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 UBE3AQ05086 875 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 SERPINB1P30740 379 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 YWHAHQ04917 246 aaPredicted RBP14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 CDC37Q16543 378 aaPredicted RBP14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 SYMPKQ92797 1274 aaKnown RBP14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 OSBPL9Q96SU4 736 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 CLIC4Q9Y696 253 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 H0YC42 278 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 DLATP10515 647 aaKnown RBP14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 MORF4L2Q15014 288 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 CENPUQ71F23 418 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 TSPYL6Q8N831 410 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 PANX2Q96RD6 677 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 UTP6Q9NYH9 597 aaKnown RBP14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 ADA2Q9NZK5 511 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 hCG_1984214I3L0E3 225 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 TRIM66O15016 1216 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 NDUFA10O95299 355 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 PYGMP11217 842 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 EPHB1P54762 984 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 MYL7Q01449 175 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 TNNI3KQ59H18 835 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 DDX25Q9UHL0 483 aaKnown RBP14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 DCTN4Q9UJW0 460 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 FPGT-TNNI3KV9GXZ4 949 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 NOS1P29475 1434 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 USP14P54578 494 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 TM6SF1Q9BZW5 370 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 GID8Q9NWU2 228 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 GUCY1A3Q02108 690 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 TMEM206Q9H813 350 aa14.12□□□□□ -0.15
SRGAP3-201ENST00000360413 ARHGEF10O15013 1369 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 UBXN8O00124 270 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 DIAPH2O60879 1101 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 HAUS5O94927 633 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 CAPRIN1Q14444 709 aaKnown RBP14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 LLGL1Q15334 1064 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 ACAD11Q709F0 780 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 ZNF653Q96CK0 615 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 HABP4Q5JVS0 413 aaKnown RBP14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 ABHD8Q96I13 439 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 TRAPPC8Q9Y2L5 1435 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 SSH2Q76I76 1423 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 KRT16P08779 473 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 SMARCA1P28370 1054 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 GPATCH4Q5T3I0 446 aaKnown RBP14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 TTC23LQ6PF05 361 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 RGS12O14924 1447 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 CFAP43Q8NDM7 1665 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 DYNLT1P63172 113 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 XKR9Q5GH70 373 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 MIS18BP1Q6P0N0 1132 aa14.11□□□□□ -0.15
SRGAP3-201ENST00000360413 HDDC2Q7Z4H3 204 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms