RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 RAB3IPQ96QF0 476 aaPredicted RBP4.94□□□□□ -1.62
PTPN22-201ENST00000359785 LZTS2Q9BRK4 669 aa4.94□□□□□ -1.62
PTPN22-201ENST00000359785 SIKE1Q9BRV8 207 aa4.94□□□□□ -1.62
PTPN22-201ENST00000359785 CCDC8Q9H0W5 538 aaPredicted RBP4.94□□□□□ -1.62
PTPN22-201ENST00000359785 RNPEPL1Q9HAU8 725 aa4.94□□□□□ -1.62
PTPN22-201ENST00000359785 DMGDHQ9UI17 866 aaKnown RBP4.94□□□□□ -1.62
PTPN22-201ENST00000359785 LUC7L2Q9Y383 392 aaKnown RBP4.94□□□□□ -1.62
PTPN22-201ENST00000359785 NUMBLQ9Y6R0 609 aa4.94□□□□□ -1.62
PTPN22-201ENST00000359785 MYH11P35749 1972 aa4.94□□□□□ -1.62
PTPN22-201ENST00000359785 SNED1Q8TER0 1413 aa4.94□□□□□ -1.62
PTPN22-201ENST00000359785 ANK1P16157 1881 aa4.94□□□□□ -1.62
PTPN22-201ENST00000359785 UBR3Q6ZT12 1888 aa4.94□□□□□ -1.62
PTPN22-201ENST00000359785 KLF18A0A0U1RQI7 1052 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 GOLGA8BA8MQT2 603 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 SLC22A1O15245 554 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 RNF8O76064 485 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 NOL4O94818 638 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 UNC5CO95185 931 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 GCP02774 474 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 SCP2P22307 547 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 PTGIRP43119 386 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 SSRP1Q08945 709 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 IL17AQ16552 155 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 SPRED3Q2MJR0 410 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CTC1Q2NKJ3 1217 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 KYAT3Q6YP21 454 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CCDC121Q6ZUS5 278 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 DDX46Q7L014 1031 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 EPM2AIP1Q7L775 607 aaPredicted RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 LCA5Q86VQ0 697 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CCDC197Q8NCU1 140 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 MIPOL1Q8TD10 442 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CKAP2Q8WWK9 683 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 SYMPKQ92797 1274 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CD101Q93033 1021 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 ART4Q93070 314 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 LRRC59Q96AG4 307 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 HVCN1Q96D96 273 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 DCAF5Q96JK2 942 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CNDP2Q96KP4 475 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 LRRC1Q9BTT6 524 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 MYLK2Q9H1R3 596 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 PABPC3Q9H361 631 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 MRM3Q9HC36 420 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 ATXN10Q9UBB4 475 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CNOT11Q9UKZ1 510 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 LRCH1Q9Y2L9 728 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 GREB1Q4ZG55 1949 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 TP73O15350 636 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 PEX11AO75192 247 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 C8BP07358 591 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 PHKG2P15735 406 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 YBX3P16989 372 aaKnown RBP eCLIP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 GBP2P32456 591 aaPredicted RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 RDXP35241 583 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 RIPPLY1Q0D2K3 151 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 KPNB1Q14974 876 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 DLGAP5Q15398 846 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 PFKFB3Q16875 520 aaPredicted RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 Q3C1V9 767 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 C6orf118Q5T5N4 469 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 DRICH1Q6PGQ1 229 aaPredicted RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 C15orf52Q6ZUT6 534 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 TMTC3Q6ZXV5 915 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 TRPM8Q7Z2W7 1104 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 SPATA21Q7Z572 469 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 JAMLQ86YT9 394 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 ZNF34Q8IZ26 560 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 FAM81AQ8TBF8 368 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 ADAMTS16Q8TE57 1224 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 DENND1AQ8TEH3 1009 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 FBXO41Q8TF61 875 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CEP95Q96GE4 821 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 ZNF333Q96JL9 665 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 LACRTQ9GZZ8 138 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 NSRP1Q9H0G5 558 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CSRNP2Q9H175 543 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 EPC1Q9H2F5 836 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 RNF41Q9H4P4 317 aaPredicted RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 LUC7LQ9NQ29 371 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 EMILIN3Q9NT22 766 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 HACD3Q9P035 362 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 WHRNQ9P202 907 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 SLAIN2Q9P270 581 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CTTNBP2NLQ9P2B4 639 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 TACC3Q9Y6A5 838 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 MYH14Q7Z406 1995 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 BTBD11A6QL63 1104 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 MPHOSPH10O00566 681 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 ZBTB43O43298 467 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 EVI5O60447 810 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 ATP4AP20648 1035 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 CRABP2P29373 138 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 KRT2P35908 639 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 LIG3P49916 1009 aa4.93□□□□□ -1.62
PTPN22-201ENST00000359785 PAPOLAP51003 745 aaKnown RBP4.93□□□□□ -1.62
PTPN22-201ENST00000359785 PDE6CP51160 858 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms