RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 DNAJC24Q6P3W2 148 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 RAD9BQ6WBX8 426 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 ANKRD7Q92527 254 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 DDX23Q9BUQ8 820 aaKnown RBP14.81□□□□□ -0.04
VCP-201ENST00000358901 MXD3Q9BW11 206 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 CD209Q9NNX6 404 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 PNMA2Q9UL42 364 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 CAPN11Q9UMQ6 739 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 CSADQ9Y600 493 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 ARHGEF40Q8TER5 1519 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 NCOA3Q9Y6Q9 1424 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 SYNJ2BP-COX16A0A087WUM0 186 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 USP17L10C9JJH3 530 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 GUCY2CP25092 1073 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 PEX3P56589 373 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 C6orf118Q5T5N4 469 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 NXNQ6DKJ4 435 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 ACTR5Q9H9F9 607 aaPredicted RBP14.81□□□□□ -0.04
VCP-201ENST00000358901 COX16Q9P0S2 106 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 SEPT10Q9P0V9 454 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 PCDHA6Q9UN73 950 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 PCDHA8Q9Y5H6 950 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 POTEFA5A3E0 1075 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 POTEIP0CG38 1075 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 CD58P19256 250 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 BASP1P80723 227 aaKnown RBP14.81□□□□□ -0.04
VCP-201ENST00000358901 POTEGQ6S5H5 508 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 POTEEQ6S8J3 1075 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 MIGA2Q7L4E1 593 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 TBC1D1Q86TI0 1168 aaPredicted RBP14.81□□□□□ -0.04
VCP-201ENST00000358901 NME8Q8N427 588 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 FLAD1Q8NFF5 587 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 RIOK1Q9BRS2 568 aaKnown RBP14.81□□□□□ -0.04
VCP-201ENST00000358901 TRIM9Q9C026 710 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 ADGRB3O60242 1522 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 GCLMP48507 274 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 ARHGAP4P98171 946 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 ZNF211Q13398 564 aaPredicted RBP14.8□□□□□ -0.04
VCP-201ENST00000358901 NCAPG2Q86XI2 1143 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 FOXP4Q8IVH2 680 aaPredicted RBP14.8□□□□□ -0.04
VCP-201ENST00000358901 RPUSD2Q8IZ73 545 aaKnown RBP14.8□□□□□ -0.04
VCP-201ENST00000358901 WDR91A4D1P6 747 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 RAD17O75943 681 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 BBS9Q3SYG4 887 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 MTERF2Q49AM1 385 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 LIMA1Q9UHB6 759 aaKnown RBP14.8□□□□□ -0.04
VCP-201ENST00000358901 MSH2P43246 934 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 AP3B2Q13367 1082 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 FAM149B1Q96BN6 582 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 CDC42BPGQ6DT37 1551 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 CASQ2O14958 399 aaPredicted RBP14.8□□□□□ -0.04
VCP-201ENST00000358901 ORC4O43929 436 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 MMEP08473 750 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 MAGOHP61326 146 aaKnown RBP14.8□□□□□ -0.04
VCP-201ENST00000358901 ADCY2Q08462 1091 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 CFAP57Q96MR6 1250 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 COA1Q9GZY4 146 aa14.8□□□□□ -0.04
VCP-201ENST00000358901 OPHN1O60890 802 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 RPS6KA4O75676 772 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 KCNB1Q14721 858 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 NR1I3Q14994 352 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 KNOP1Q1ED39 458 aaKnown RBP14.79□□□□□ -0.04
VCP-201ENST00000358901 MROH7-TTC4A0A0A0MT08 1334 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 UTYO14607 1347 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 PODXLO00592 558 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 ZNF185O15231 689 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 EVI5O60447 810 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 RFX5P48382 616 aaPredicted RBP14.79□□□□□ -0.04
VCP-201ENST00000358901 RINT1Q6NUQ1 792 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 TMEM179Q6ZVK1 233 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 CDKL2Q92772 493 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 AGPAT5Q9NUQ2 364 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 BCAP29Q9UHQ4 241 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 BCS1LQ9Y276 419 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 AFG3L2Q9Y4W6 797 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 SETBP1Q9Y6X0 1596 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 IQSEC2Q5JU85 1478 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 MT-ND3P03897 115 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 RPS6KA2Q15349 733 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 MAP3K21Q5TCX8 1036 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 RASIP1Q5U651 963 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 PDCD7Q8N8D1 485 aaKnown RBP14.79□□□□□ -0.04
VCP-201ENST00000358901 NSMCE1Q8WV22 266 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 TRIM10Q9UDY6 481 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 ANAPC7Q9UJX3 599 aa14.79□□□□□ -0.04
VCP-201ENST00000358901 MIF4GDA9UHW6 222 aaKnown RBP14.78□□□□□ -0.04
VCP-201ENST00000358901 CTIFO43310 598 aaKnown RBP14.78□□□□□ -0.04
VCP-201ENST00000358901 GRIN1Q05586 938 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 TBC1D9BQ66K14 1250 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 ADSSL1Q8N142 457 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 RNF169Q8NCN4 708 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 THOC1Q96FV9 657 aaKnown RBP14.78□□□□□ -0.04
VCP-201ENST00000358901 LRRC1Q9BTT6 524 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 CCSER1Q9C0I3 900 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 SART1O43290 800 aaKnown RBP14.78□□□□□ -0.04
VCP-201ENST00000358901 ZNF449Q6P9G9 518 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 RASGRP2Q7LDG7 609 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 CCDC117Q8IWD4 279 aaPredicted RBP14.78□□□□□ -0.04
VCP-201ENST00000358901 HEMGNQ9BXL5 484 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 CNOT8Q9UFF9 292 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms