RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ANKLE1Q8NAG6 615 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 NT5C3AQ9H0P0 336 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 FAM13BQ9NYF5 915 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 PHF24Q9UPV7 400 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 TRPC6Q9Y210 931 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 A0A1W2PQ45 241 aaPredicted RBP17.06■□□□□ 0.32
TPM1-206ENST00000358278 A0A1W2PQY0 241 aa17.06■□□□□ 0.32
TPM1-206ENST00000358278 SPATA31C1P0DKV0 1188 aa17.06■□□□□ 0.32
TPM1-206ENST00000358278 PSEN2P49810 448 aa17.06■□□□□ 0.32
TPM1-206ENST00000358278 MFSD10Q14728 455 aa17.06■□□□□ 0.32
TPM1-206ENST00000358278 KARSQ15046 597 aaKnown RBP17.06■□□□□ 0.32
TPM1-206ENST00000358278 RESP18Q5W5W9 173 aa17.06■□□□□ 0.32
TPM1-206ENST00000358278 TMEM87AQ8NBN3 555 aa17.06■□□□□ 0.32
TPM1-206ENST00000358278 KAT2BQ92831 832 aa17.06■□□□□ 0.32
TPM1-206ENST00000358278 FAM167AQ96KS9 214 aa17.06■□□□□ 0.32
TPM1-206ENST00000358278 CCSER1Q9C0I3 900 aa17.06■□□□□ 0.32
TPM1-206ENST00000358278 WRAP73Q9P2S5 460 aaPredicted RBP17.06■□□□□ 0.32
TPM1-206ENST00000358278 CCDC39Q9UFE4 941 aa17.06■□□□□ 0.32
TPM1-206ENST00000358278 SLC26A4O43511 780 aa17.05■□□□□ 0.32
TPM1-206ENST00000358278 ZNF862O60290 1169 aa17.05■□□□□ 0.32
TPM1-206ENST00000358278 OATP04181 439 aa17.05■□□□□ 0.32
TPM1-206ENST00000358278 MUTP22033 750 aa17.05■□□□□ 0.32
TPM1-206ENST00000358278 C4orf19Q8IY42 314 aa17.05■□□□□ 0.32
TPM1-206ENST00000358278 CCDC43Q96MW1 224 aaKnown RBP17.05■□□□□ 0.32
TPM1-206ENST00000358278 PLIN2Q99541 437 aa17.05■□□□□ 0.32
TPM1-206ENST00000358278 STARD7Q9NQZ5 370 aa17.05■□□□□ 0.32
TPM1-206ENST00000358278 DDX19AQ9NUU7 478 aaKnown RBP17.05■□□□□ 0.32
TPM1-206ENST00000358278 SEPT9Q9UHD8 586 aaPredicted RBP17.05■□□□□ 0.32
TPM1-206ENST00000358278 KIAA1024Q9UPX6 916 aa17.05■□□□□ 0.32
TPM1-206ENST00000358278 A0A1W2PQ27 194 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 A0A1W2PQ64 194 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 A0A1W2PQD8 194 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 CMA1P23946 247 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 PSMC6P62333 389 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 PLCB4Q15147 1175 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 ECM1Q16610 540 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 FSIP1Q8NA03 581 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 ATP8B4Q8TF62 1192 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 BBXQ8WY36 941 aaPredicted RBP17.04■□□□□ 0.32
TPM1-206ENST00000358278 MRPS27Q92552 414 aaKnown RBP17.04■□□□□ 0.32
TPM1-206ENST00000358278 RNPEPQ9H4A4 650 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
TPM1-206ENST00000358278 PLCG1P19174 1290 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 ATP4AP20648 1035 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 YWHABP31946 246 aaKnown RBP17.04■□□□□ 0.32
TPM1-206ENST00000358278 GRB10Q13322 594 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 XKR3Q5GH77 459 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 FAM47CQ5HY64 1035 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 HYIQ5T013 277 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 PDILTQ8N807 584 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 C7orf31Q8N865 590 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 PIGOQ8TEQ8 1089 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 DIS3LQ8TF46 1054 aaKnown RBP17.04■□□□□ 0.32
TPM1-206ENST00000358278 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 SENP6Q9GZR1 1112 aaPredicted RBP17.04■□□□□ 0.32
TPM1-206ENST00000358278 NRBP2Q9NSY0 501 aa17.04■□□□□ 0.32
TPM1-206ENST00000358278 A0A1B0GVL5 298 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 CCDC85CA6NKD9 419 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 HAS3O00219 553 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 HBP1O60381 514 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 LYPLA2O95372 231 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 PFKFB1P16118 471 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 EN2P19622 333 aaPredicted RBP17.03■□□□□ 0.32
TPM1-206ENST00000358278 MNX1P50219 401 aaPredicted RBP17.03■□□□□ 0.32
TPM1-206ENST00000358278 NBPF20Q3BBV1 942 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 OTUD6AQ7L8S5 288 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 PPP1R13LQ8WUF5 828 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 PNMA5Q96PV4 448 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 PANK2Q9BZ23 570 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 DNM3Q9UQ16 869 aa17.03■□□□□ 0.32
TPM1-206ENST00000358278 A0A0U1RQG5 324 aaPredicted RBP17.02■□□□□ 0.32
TPM1-206ENST00000358278 TMEM150BA6NC51 233 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 SMIM10L2AP0DMW4 78 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 SMIM10L2BP0DMW5 78 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 STAT6P42226 847 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 PPFIA1Q13136 1202 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 ITGA7Q13683 1181 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 TMEM119Q4V9L6 283 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 RRAGBQ5VZM2 374 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 PLA2G4FQ68DD2 849 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 CCDC73Q6ZRK6 1079 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 KCNH3Q9ULD8 1083 aa17.02■□□□□ 0.32
TPM1-206ENST00000358278 A0A087WWV3 80 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 ZBTB39O15060 712 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 GADD45BO75293 160 aaPredicted RBP17.01■□□□□ 0.31
TPM1-206ENST00000358278 UBE2HP62256 183 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 IGBP1P78318 339 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 MTERF2Q49AM1 385 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 XKR9Q5GH70 373 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 ANO5Q75V66 913 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 KCTD17Q8N5Z5 321 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 PAWRQ96IZ0 340 aaKnown RBP17.01■□□□□ 0.31
TPM1-206ENST00000358278 A0A087X0B3 334 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 E9PMD0 336 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 POLR2DO15514 142 aaKnown RBP17.01■□□□□ 0.31
TPM1-206ENST00000358278 INSRRP14616 1297 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 SOX10P56693 466 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 NFRKBQ6P4R8 1299 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 KCNK18Q7Z418 384 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms