RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 CYP4F11Q9HBI6 524 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 ZNF215Q9UL58 517 aaPredicted RBP11.31□□□□□ -0.6
FXR1-202ENST00000357559 STXBP2Q15833 593 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 DDX53Q86TM3 631 aaKnown RBP11.31□□□□□ -0.6
FXR1-202ENST00000357559 ASZ1Q8WWH4 475 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 COA7Q96BR5 231 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 SLC13A1Q9BZW2 595 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 C14orf93Q9H972 538 aaKnown RBP11.31□□□□□ -0.6
FXR1-202ENST00000357559 ZNF229Q9UJW7 825 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 SPAG7O75391 227 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 KIAA2013Q8IYS2 634 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 ST13P4Q8IZP2 240 aaPredicted RBP11.31□□□□□ -0.6
FXR1-202ENST00000357559 SLC24A3Q9HC58 644 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 NGRNQ9NPE2 291 aaKnown RBP11.31□□□□□ -0.6
FXR1-202ENST00000357559 EFCAB14O75071 495 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 RAD17O75943 681 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 SLC52A2Q9HAB3 445 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 FANCAO15360 1455 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 LMNAP02545 664 aaKnown RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 IMPDH2P12268 514 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 CIITAP33076 1130 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 KIAA1755Q5JYT7 1200 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 TAS2R42Q7RTR8 314 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 RUNDC3BQ96NL0 473 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 TPCN1Q9ULQ1 816 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 TTC7AQ9ULT0 858 aaPredicted RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 RRP15Q9Y3B9 282 aaKnown RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 TMCC1O94876 653 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 TCP1P17987 556 aaKnown RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 CDC25AP30304 524 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 PTH1RQ03431 593 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 LRRC74AQ0VAA2 488 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 TAF1BQ53T94 588 aaPredicted RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 CCDC51Q96ER9 411 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 PAWRQ96IZ0 340 aaKnown RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 ADCY3O60266 1144 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 PPARGP37231 505 aaPredicted RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 KRT17Q04695 432 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 VPS11Q9H270 941 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 A0A0D9SFI3 127 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 DFFAO00273 331 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 FMNL1O95466 1100 aaPredicted RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 STAT2P52630 851 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 MED23Q9ULK4 1368 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 AOC3Q16853 763 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 HEMGNQ9BXL5 484 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 TMEM63CQ9P1W3 806 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 LBHD1Q9BQE6 289 aaPredicted RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 SAYSD1Q9NPB0 183 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 SNX5Q9Y5X3 404 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 PLB1Q6P1J6 1458 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 DENND3A2RUS2 1198 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 SGSM2O43147 1006 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 FANCBQ8NB91 859 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 LARP4BQ92615 738 aaKnown RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 DHX38Q92620 1227 aaKnown RBP11.3□□□□□ -0.6
FXR1-202ENST00000357559 VMP1Q96GC9 406 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 TRPC7Q9HCX4 862 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 PCDHA5Q9Y5H7 936 aa11.3□□□□□ -0.6
FXR1-202ENST00000357559 GJC2Q5T442 439 aaPredicted RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 C11orf96Q7Z7L8 435 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 NDUFAF2Q8N183 169 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 ARL8AQ96BM9 186 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 NACC1Q96RE7 527 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 ZMYND12Q9H0C1 365 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 TRAF3IP3Q9Y228 551 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 ANKRD65E5RJM6 399 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 KCNQ4P56696 695 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 C1orf146Q5VVC0 180 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 PATL1Q86TB9 770 aaKnown RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 TBC1D1Q86TI0 1168 aaPredicted RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 CCNYL1Q8N7R7 359 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 KIFC3Q9BVG8 833 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 GYG2O15488 501 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 SLC9A1P19634 815 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 DR1Q01658 176 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 NNTQ13423 1086 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 C1orf131Q8NDD1 294 aaKnown RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 DCTN4Q9UJW0 460 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 ATXN3P54252 364 aaPredicted RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 BPIFB4P59827 614 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 CTTNQ14247 550 aaKnown RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 CCDC142Q17RM4 750 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 DEPDC1Q5TB30 811 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 TTLL7Q6ZT98 887 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 RRM2BQ7LG56 351 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 ELAC2Q9BQ52 826 aaKnown RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 FBXO2Q9UK22 296 aaPredicted RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 IQANK1A0A1B0GTG1 560 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 KRT87PA6NCN2 255 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 PRR23D1E9PI22 279 aaPredicted RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 PRR23D2P0DMB1 279 aaPredicted RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 RPS8P62241 208 aaKnown RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 LRRC8EQ6NSJ5 796 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 MSTO1Q9BUK6 570 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 MAPK13O15264 365 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 HSPA1AP0DMV8 641 aaKnown RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 HSPA1BP0DMV9 641 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms