RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 MIS18BP1Q6P0N0 1132 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 SRRM1Q8IYB3 904 aaKnown RBP15.95■□□□□ 0.14
CHD4-201ENST00000357008 EIF2AQ9BY44 585 aaKnown RBP15.95■□□□□ 0.14
CHD4-201ENST00000357008 MRFAP1Q9Y605 127 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 PLEKHG1Q9ULL1 1385 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 ARHGAP31Q2M1Z3 1444 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 LRRC53A6NM62 1247 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 INO80B-WBP1J3KQ70 363 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 GSTA4O15217 222 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 RNF207Q6ZRF8 634 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 CDHR1Q96JP9 859 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 INO80BQ9C086 356 aaPredicted RBP15.95■□□□□ 0.14
CHD4-201ENST00000357008 ZCCHC17Q9NP64 241 aaKnown RBP15.95■□□□□ 0.14
CHD4-201ENST00000357008 PPARGC1AQ9UBK2 798 aaKnown RBP15.95■□□□□ 0.14
CHD4-201ENST00000357008 ADGBQ8N7X0 1667 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 ARL4CP56559 192 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 TMPRSS15P98073 1019 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 NLRP14Q86W24 1093 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 SKA2Q8WVK7 121 aaPredicted RBP15.94■□□□□ 0.14
CHD4-201ENST00000357008 PIH1D3Q9NQM4 214 aaKnown RBP15.94■□□□□ 0.14
CHD4-201ENST00000357008 DNAJC12Q9UKB3 198 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 WDR19Q8NEZ3 1342 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 COPEO14579 308 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 DDIT3P35638 169 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 HSPA2P54652 639 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 TBC1D10BQ4KMP7 808 aaPredicted RBP15.94■□□□□ 0.14
CHD4-201ENST00000357008 PNMA6FA0A0J9YX94 578 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 EEF1DP29692 281 aaKnown RBP15.94■□□□□ 0.14
CHD4-201ENST00000357008 NAA30Q147X3 362 aaPredicted RBP15.94■□□□□ 0.14
CHD4-201ENST00000357008 TMTC4Q5T4D3 741 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 OR6B2Q6IFH4 312 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 C4orf50Q6ZRC1 276 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 DDX17Q92841 729 aaKnown RBP15.94■□□□□ 0.14
CHD4-201ENST00000357008 STRBPQ96SI9 672 aaKnown RBP15.94■□□□□ 0.14
CHD4-201ENST00000357008 FAM96AQ9H5X1 160 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 PLEKHA8P1O95397 391 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 IGBP1P78318 339 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 SURF1Q15526 300 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 SEC31BQ9NQW1 1179 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 G3BP2Q9UN86 482 aaKnown RBP15.94■□□□□ 0.14
CHD4-201ENST00000357008 PMS2P54278 862 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 EPM2AIP1Q7L775 607 aaPredicted RBP15.94■□□□□ 0.14
CHD4-201ENST00000357008 TTC17Q96AE7 1141 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 NXF1Q9UBU9 619 aaKnown RBP15.94■□□□□ 0.14
CHD4-201ENST00000357008 FIS1Q9Y3D6 152 aa15.94■□□□□ 0.14
CHD4-201ENST00000357008 H0Y3Z8 333 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 TTC25Q96NG3 672 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 SNX25Q9H3E2 840 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 PVALEFA0A1B0GWK0 134 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 TRIM49BA6NDI0 452 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 ZNF233A6NK53 670 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 CTIFO43310 598 aaKnown RBP15.93■□□□□ 0.14
CHD4-201ENST00000357008 UBE2SQ16763 222 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 FAM47EQ6ZV65 393 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 NCAPG2Q86XI2 1143 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 MYLK4Q86YV6 388 aaPredicted RBP15.93■□□□□ 0.14
CHD4-201ENST00000357008 ZFP69BQ9UJL9 534 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 LOC102724428A0A0B4J2F2 783 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 USP17L8P0C7I0 530 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 PRCPP42785 496 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 CRKLP46109 303 aaKnown RBP15.93■□□□□ 0.14
CHD4-201ENST00000357008 SIK1P57059 783 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 GSPT2Q8IYD1 628 aaKnown RBP15.93■□□□□ 0.14
CHD4-201ENST00000357008 RBM41Q96IZ5 413 aaKnown RBP15.93■□□□□ 0.14
CHD4-201ENST00000357008 ATP6V1G3Q96LB4 118 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 BHMT2Q9H2M3 363 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 KRT82Q9NSB4 513 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 GJB4Q9NTQ9 266 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 SYDE2Q5VT97 1194 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 USPL1Q5W0Q7 1092 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 KRT39Q6A163 491 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 BZW1Q7L1Q6 419 aaKnown RBP15.93■□□□□ 0.14
CHD4-201ENST00000357008 DHX40Q8IX18 779 aaKnown RBP15.93■□□□□ 0.14
CHD4-201ENST00000357008 YY1AP1Q9H869 796 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 DISP1Q96F81 1524 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 ZRANB2O95218 330 aaKnown RBP eCLIP15.93■□□□□ 0.14
CHD4-201ENST00000357008 FGD4Q96M96 766 aa15.93■□□□□ 0.14
CHD4-201ENST00000357008 TARSL2A2RTX5 802 aaKnown RBP15.92■□□□□ 0.14
CHD4-201ENST00000357008 GPC5P78333 572 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 RSRC2Q7L4I2 434 aaKnown RBP15.92■□□□□ 0.14
CHD4-201ENST00000357008 COG1Q8WTW3 980 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 TRIM15Q9C019 465 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 TAF1DQ9H5J8 278 aaPredicted RBP15.92■□□□□ 0.14
CHD4-201ENST00000357008 CFAP73A6NFT4 308 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 GFPT1Q06210 699 aaPredicted RBP15.92■□□□□ 0.14
CHD4-201ENST00000357008 NLRP10Q86W26 655 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 RPS6KC1Q96S38 1066 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 APOBEC2Q9Y235 224 aaKnown RBP15.92■□□□□ 0.14
CHD4-201ENST00000357008 ZBTB1Q9Y2K1 713 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 LMTK3Q96Q04 1460 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 CYP2D7A0A087X1C5 515 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 KRT38O76015 456 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 HSPA4LO95757 839 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 KRT10P13645 584 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 BIRC2Q13490 618 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 FAM47CQ5HY64 1035 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 BRIP1Q9BX63 1249 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 CHGBP05060 677 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms