RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 C1orf54Q8WWF1 131 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 FAM84BQ96KN1 310 aaPredicted RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 PARVGQ9HBI0 331 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 ANKARQ7Z5J8 1434 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 PDHA1P08559 390 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 MARK3P27448 753 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 PPM1FP49593 454 aaPredicted RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 ERVK-24P63145 666 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 PDE1CQ14123 709 aaPredicted RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 MTERF2Q49AM1 385 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 NLRP14Q86W24 1093 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 CALN1Q9BXU9 219 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 MAGEF1Q9HAY2 307 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 KMT5AQ9NQR1 393 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 PALLDQ8WX93 1383 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 PNMA6FA0A0J9YX94 578 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 PLS3P13797 630 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 KLRK1P26718 216 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 PTK2Q05397 1052 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 EZH2Q15910 746 aaKnown RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 SRRM1Q8IYB3 904 aaKnown RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 NME8Q8N427 588 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 GRK7Q8WTQ7 553 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 RAB3IPQ96QF0 476 aaPredicted RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 BRIP1Q9BX63 1249 aa11.33□□□□□ -0.6
SMG7-201ENST00000347615 NOC2LQ9Y3T9 749 aaKnown RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 BZW2Q9Y6E2 419 aaKnown RBP11.33□□□□□ -0.6
SMG7-201ENST00000347615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.32□□□□□ -0.6
SMG7-201ENST00000347615 LOC102724159A0A0B4J2E5 919 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 PHF20L1A8MW92 1017 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 CRCPO75575 148 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 PWP2Q15269 919 aaKnown RBP11.32□□□□□ -0.6
SMG7-201ENST00000347615 GJB7Q6PEY0 223 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 SGMS1Q86VZ5 419 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 CEP170P1Q96L14 293 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 CELF4Q9BZC1 486 aaKnown RBP11.32□□□□□ -0.6
SMG7-201ENST00000347615 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 H3BQF6 201 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 LRRC63Q05C16 580 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 EMBQ6PCB8 327 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 RNF207Q6ZRF8 634 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 SPATA24Q86W54 205 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 ADGRF4Q8IZF3 695 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 GSDMBQ8TAX9 411 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 DYDC2Q96IM9 177 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 PBKQ96KB5 322 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 GBP5Q96PP8 586 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 MRPL11Q9Y3B7 192 aaKnown RBP11.32□□□□□ -0.6
SMG7-201ENST00000347615 EXOC1LA0A1B0GW35 172 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 SMIM24O75264 130 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 GH2P01242 217 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 NR3C1P04150 777 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 PCP11498 1178 aaKnown RBP11.32□□□□□ -0.6
SMG7-201ENST00000347615 ICE2Q659A1 982 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 RASGRP2Q7LDG7 609 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 RNF169Q8NCN4 708 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 WHAMMQ8TF30 809 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 SAAL1Q96ER3 474 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 PHF20Q9BVI0 1012 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 CEP72Q9P209 647 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 TUBE1Q9UJT0 475 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 INPP5FQ9Y2H2 1132 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 A0A0G2JND7 137 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 BMP3P12645 472 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 SLC8A1P32418 973 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 IL9RQ01113 521 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 SYDE2Q5VT97 1194 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 HPCAL4Q9UM19 191 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 CAPN11Q9UMQ6 739 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 ABCB11O95342 1321 aa11.32□□□□□ -0.6
SMG7-201ENST00000347615 LRRD1A4D1F6 860 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 CARSP49589 748 aaKnown RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 TFAMQ00059 246 aaKnown RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 TAF11Q15544 211 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 BBS9Q3SYG4 887 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 MAML1Q92585 1016 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 HAUS2Q9NVX0 235 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 DCTN4Q9UJW0 460 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 INO80Q9ULG1 1556 aaPredicted RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 SEMA3EO15041 775 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 MXI1P50539 228 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 SEPT2Q15019 361 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 HSPH1Q92598 858 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 CDCA7Q9BWT1 371 aaPredicted RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 GINM1Q9NU53 330 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 BARHL2Q9NY43 387 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 TTI1O43156 1089 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 NMT1P30419 496 aaKnown RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 BRINP3Q76B58 766 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 MIPOL1Q8TD10 442 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 ANAPC7Q9UJX3 599 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 CCDC195A0A1B0GUA6 201 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 LRRIQ3A6PVS8 624 aaPredicted RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 ERVV-1B6SEH8 477 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms