RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 LCHNA4D1U4 455 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 RSPH10B2B2RC85 870 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 CDKL5O76039 1030 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 PFKMP08237 780 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 RSPH10BP0C881 870 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 USP11P51784 963 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 PIK3AP1Q6ZUJ8 805 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 PLPPR4Q7Z2D5 763 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 CCDC155Q8N6L0 562 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 DBF4BQ8NFT6 615 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 DNAJB3Q8WWF6 145 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 SH2B1Q9NRF2 756 aaPredicted RBP18.19■□□□□ 0.5
RAB5C-201ENST00000346213 SLC4A7Q9Y6M7 1214 aa18.19■□□□□ 0.5
RAB5C-201ENST00000346213 TMEM150BA6NC51 233 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 EPOPA6NHQ4 379 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 CHMP2AO43633 222 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 ATP2A2P16615 1042 aaKnown RBP18.18■□□□□ 0.5
RAB5C-201ENST00000346213 GUCY1B3Q02153 619 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 NONOQ15233 471 aaKnown RBP eCLIP18.18■□□□□ 0.5
RAB5C-201ENST00000346213 FAM26DQ5JW98 314 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 MCTP2Q6DN12 878 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 GBP4Q96PP9 640 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 TRPC6Q9Y210 931 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 MAFBQ9Y5Q3 323 aaPredicted RBP18.18■□□□□ 0.5
RAB5C-201ENST00000346213 SPTBN5Q9NRC6 3674 aaKnown RBP18.18■□□□□ 0.5
RAB5C-201ENST00000346213 BTBD18B2RXH4 712 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 PRKCSHP14314 528 aaPredicted RBP18.18■□□□□ 0.5
RAB5C-201ENST00000346213 TMEM62Q0P6H9 643 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 PLEKHG4Q58EX7 1191 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 ZNF746Q6NUN9 644 aaPredicted RBP18.18■□□□□ 0.5
RAB5C-201ENST00000346213 CNKSR3Q6P9H4 555 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 TRMT1LQ7Z2T5 733 aaKnown RBP18.18■□□□□ 0.5
RAB5C-201ENST00000346213 HAS1Q92839 578 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 ZNF576Q9H609 170 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 XIRP2A4UGR9 3374 aa18.18■□□□□ 0.5
RAB5C-201ENST00000346213 POTEB3A0JP26 581 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 EML1O00423 815 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 STBD1O95210 358 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 ADGRE1Q14246 886 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 LETM2Q2VYF4 491 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 KRT40Q6A162 431 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 POTEBQ6S5H4 581 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 KRT25Q7Z3Z0 450 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 ATP8B4Q8TF62 1192 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 FAM49AQ9H0Q0 323 aaPredicted RBP18.17■□□□□ 0.5
RAB5C-201ENST00000346213 CDHR5Q9HBB8 845 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 KCNMB3Q9NPA1 279 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 ZNF302Q9NR11 478 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 TBC1D22BQ9NU19 505 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 GABBR1Q9UBS5 961 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 VAV3Q9UKW4 847 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 VCANP13611 3396 aa18.17■□□□□ 0.5
RAB5C-201ENST00000346213 COL4A6Q14031 1691 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.16■□□□□ 0.5
RAB5C-201ENST00000346213 BACH1O14867 736 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 MMP1P03956 469 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 CA3P07451 260 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 GHRP10912 638 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 LPIN1Q14693 890 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 GALNT17Q6IS24 598 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 PDXDC2PQ6P474 469 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 RPAINQ86UA6 219 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 HERC6Q8IVU3 1022 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 LINC01599Q8WXQ3 324 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 AZI2Q9H6S1 392 aa18.16■□□□□ 0.5
RAB5C-201ENST00000346213 AGO3Q9H9G7 860 aaKnown RBP18.16■□□□□ 0.5
RAB5C-201ENST00000346213 WRAP73Q9P2S5 460 aaPredicted RBP18.16■□□□□ 0.5
RAB5C-201ENST00000346213 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.16■□□□□ 0.5
RAB5C-201ENST00000346213 DDX11L8A8MPP1 907 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 LRCH2Q5VUJ6 765 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 MTHFD1LQ6UB35 978 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 FAM177A1Q8N128 213 aaPredicted RBP18.15■□□□□ 0.5
RAB5C-201ENST00000346213 SH2D3AQ9BRG2 576 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 DDX25Q9UHL0 483 aaKnown RBP18.15■□□□□ 0.5
RAB5C-201ENST00000346213 STXBP5LQ9Y2K9 1186 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 CDY2AQ9Y6F7 541 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 C22orf31O95567 290 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 KRT76Q01546 638 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 MIS18BP1Q6P0N0 1132 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 MOXD1Q6UVY6 613 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 NEK8Q86SG6 692 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 DIS3L2Q8IYB7 885 aaKnown RBP18.15■□□□□ 0.5
RAB5C-201ENST00000346213 USP38Q8NB14 1042 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 TMEM40Q8WWA1 233 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 CEP89Q96ST8 783 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 RIT2Q99578 217 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 PRDM12Q9H4Q4 367 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 DISC1Q9NRI5 854 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 PCDHA10Q9Y5I2 948 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 TCHHQ07283 1943 aa18.15■□□□□ 0.5
RAB5C-201ENST00000346213 KIF28PB7ZC32 967 aa18.14■□□□□ 0.49
RAB5C-201ENST00000346213 RFXAPO00287 272 aa18.14■□□□□ 0.49
RAB5C-201ENST00000346213 GAS7O60861 476 aa18.14■□□□□ 0.49
RAB5C-201ENST00000346213 BAIAP3O94812 1187 aa18.14■□□□□ 0.49
RAB5C-201ENST00000346213 GNAT1P11488 350 aa18.14■□□□□ 0.49
RAB5C-201ENST00000346213 KLRC1P26715 233 aa18.14■□□□□ 0.49
RAB5C-201ENST00000346213 SPIRE1Q08AE8 756 aa18.14■□□□□ 0.49
RAB5C-201ENST00000346213 LINC01465Q8N7H1 131 aa18.14■□□□□ 0.49
RAB5C-201ENST00000346213 PPP1R16BQ96T49 567 aa18.14■□□□□ 0.49
RAB5C-201ENST00000346213 CERS4Q9HA82 394 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms