RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 GBP3Q9H0R5 595 aa16.98■□□□□ 0.31
UPF3B-202ENST00000345865 RANBP17Q9H2T7 1088 aaKnown RBP16.98■□□□□ 0.31
UPF3B-202ENST00000345865 WRAP73Q9P2S5 460 aaPredicted RBP16.98■□□□□ 0.31
UPF3B-202ENST00000345865 ARMCX3Q9UH62 379 aaPredicted RBP16.98■□□□□ 0.31
UPF3B-202ENST00000345865 CLIC2O15247 247 aa16.98■□□□□ 0.31
UPF3B-202ENST00000345865 DLGAP5Q15398 846 aa16.98■□□□□ 0.31
UPF3B-202ENST00000345865 LRCH2Q5VUJ6 765 aa16.98■□□□□ 0.31
UPF3B-202ENST00000345865 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
UPF3B-202ENST00000345865 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
UPF3B-202ENST00000345865 GSPT2Q8IYD1 628 aaKnown RBP16.98■□□□□ 0.31
UPF3B-202ENST00000345865 GOPCQ9HD26 462 aa16.98■□□□□ 0.31
UPF3B-202ENST00000345865 ZNF277Q9NRM2 450 aaPredicted RBP16.98■□□□□ 0.31
UPF3B-202ENST00000345865 ADAMTS1Q9UHI8 967 aa16.98■□□□□ 0.31
UPF3B-202ENST00000345865 TARSL2A2RTX5 802 aaKnown RBP16.97■□□□□ 0.31
UPF3B-202ENST00000345865 ERICH4A6NGS2 130 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 TGFB1I1O43294 461 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 GCNT3O95395 438 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 NR3C1P04150 777 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 EPS15P42566 896 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 SLC18A3Q16572 532 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 C1orf186Q6ZWK4 172 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 ZNF572Q7Z3I7 529 aaPredicted RBP16.97■□□□□ 0.31
UPF3B-202ENST00000345865 HDAC7Q8WUI4 952 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 SLC5A5Q92911 643 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 PACSIN1Q9BY11 444 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 TYW1Q9NV66 732 aaKnown RBP16.97■□□□□ 0.31
UPF3B-202ENST00000345865 STK24Q9Y6E0 443 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 KIF13BQ9NQT8 1826 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 GCOM1H8Y6P7 765 aaPredicted RBP16.97■□□□□ 0.31
UPF3B-202ENST00000345865 POLR2MP0CAP2 368 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 ARP10275 920 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 KLRC1P26715 233 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 PON1P27169 355 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 NMT1P30419 496 aaKnown RBP16.97■□□□□ 0.31
UPF3B-202ENST00000345865 MRPS25P82663 173 aaKnown RBP16.97■□□□□ 0.31
UPF3B-202ENST00000345865 PPP2R5CQ13362 524 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 IRF2BP2Q7Z5L9 587 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 ALS2CR12Q96Q35 445 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 VCPKMTQ9H867 229 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 VEZTQ9HBM0 779 aa16.97■□□□□ 0.31
UPF3B-202ENST00000345865 AJAP1Q9UKB5 411 aaPredicted RBP16.97■□□□□ 0.31
UPF3B-202ENST00000345865 ZMYM2Q9UBW7 1377 aa16.96■□□□□ 0.31
UPF3B-202ENST00000345865 TBCAO75347 108 aaKnown RBP16.96■□□□□ 0.31
UPF3B-202ENST00000345865 AFPP02771 609 aaKnown RBP16.96■□□□□ 0.31
UPF3B-202ENST00000345865 UCHL3P15374 230 aa16.96■□□□□ 0.31
UPF3B-202ENST00000345865 KLHL30Q0D2K2 578 aa16.96■□□□□ 0.31
UPF3B-202ENST00000345865 ZC2HC1CQ53FD0 456 aaPredicted RBP16.96■□□□□ 0.31
UPF3B-202ENST00000345865 KSR1Q8IVT5 923 aa16.96■□□□□ 0.31
UPF3B-202ENST00000345865 SPATA4Q8NEY3 305 aa16.96■□□□□ 0.31
UPF3B-202ENST00000345865 GDAP1L1Q96MZ0 367 aa16.96■□□□□ 0.31
UPF3B-202ENST00000345865 NOX5Q96PH1 765 aa16.96■□□□□ 0.31
UPF3B-202ENST00000345865 OLFML3Q9NRN5 406 aa16.96■□□□□ 0.31
UPF3B-202ENST00000345865 HYOU1Q9Y4L1 999 aa16.96■□□□□ 0.31
UPF3B-202ENST00000345865 CALUO43852 315 aaPredicted RBP16.96■□□□□ 0.3
UPF3B-202ENST00000345865 PTK2Q05397 1052 aa16.96■□□□□ 0.3
UPF3B-202ENST00000345865 EPHA7Q15375 998 aa16.96■□□□□ 0.3
UPF3B-202ENST00000345865 DCAF17Q5H9S7 520 aaPredicted RBP16.96■□□□□ 0.3
UPF3B-202ENST00000345865 RNF10Q8N5U6 811 aaKnown RBP16.96■□□□□ 0.3
UPF3B-202ENST00000345865 RBM46Q8TBY0 533 aaKnown RBP16.96■□□□□ 0.3
UPF3B-202ENST00000345865 SLC35C1Q96A29 364 aa16.96■□□□□ 0.3
UPF3B-202ENST00000345865 FIZ1Q96SL8 496 aa16.96■□□□□ 0.3
UPF3B-202ENST00000345865 LRRC1Q9BTT6 524 aa16.96■□□□□ 0.3
UPF3B-202ENST00000345865 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.96■□□□□ 0.3
UPF3B-202ENST00000345865 TUFT1Q9NNX1 390 aa16.96■□□□□ 0.3
UPF3B-202ENST00000345865 ADAM21Q9UKJ8 722 aa16.96■□□□□ 0.3
UPF3B-202ENST00000345865 SCAF8Q9UPN6 1271 aaKnown RBP16.96■□□□□ 0.3
UPF3B-202ENST00000345865 XRCC5P13010 732 aaKnown RBP16.95■□□□□ 0.3
UPF3B-202ENST00000345865 TCP1P17987 556 aaKnown RBP16.95■□□□□ 0.3
UPF3B-202ENST00000345865 EN1Q05925 392 aaPredicted RBP16.95■□□□□ 0.3
UPF3B-202ENST00000345865 NAB2Q15742 525 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 ASIC2Q16515 512 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 CEP55Q53EZ4 464 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 CCNI2Q6ZMN8 369 aaPredicted RBP16.95■□□□□ 0.3
UPF3B-202ENST00000345865 DNAAF5Q86Y56 855 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 MMGT1Q8N4V1 131 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 CHURC1Q8WUH1 139 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 BORCS6Q96GS4 357 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 SIX2Q9NPC8 291 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 PLCB1Q9NQ66 1216 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 DMGDHQ9UI17 866 aaKnown RBP16.95■□□□□ 0.3
UPF3B-202ENST00000345865 COG2Q14746 738 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 EXOC3L4Q17RC7 722 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 ZNF571Q7Z3V5 609 aaPredicted RBP16.95■□□□□ 0.3
UPF3B-202ENST00000345865 LDHDQ86WU2 507 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 MS4A14Q96JA4 679 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 UNC45AQ9H3U1 944 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 PGAP2Q9UHJ9 254 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 PCDHB13Q9Y5F0 798 aa16.95■□□□□ 0.3
UPF3B-202ENST00000345865 ZC3H4Q9UPT8 1303 aaKnown RBP16.94■□□□□ 0.3
UPF3B-202ENST00000345865 PALMO75781 387 aa16.94■□□□□ 0.3
UPF3B-202ENST00000345865 CAP2P40123 477 aa16.94■□□□□ 0.3
UPF3B-202ENST00000345865 PRELPP51888 382 aa16.94■□□□□ 0.3
UPF3B-202ENST00000345865 NAP1L1P55209 391 aaKnown RBP16.94■□□□□ 0.3
UPF3B-202ENST00000345865 KIAA0753Q2KHM9 967 aa16.94■□□□□ 0.3
UPF3B-202ENST00000345865 TCERG1LQ5VWI1 586 aa16.94■□□□□ 0.3
UPF3B-202ENST00000345865 B3GNT9Q6UX72 402 aa16.94■□□□□ 0.3
UPF3B-202ENST00000345865 OGFOD1Q8N543 542 aa16.94■□□□□ 0.3
UPF3B-202ENST00000345865 MYCT1Q8N699 235 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms