RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 PLAGL2Q9UPG8 496 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 DIS3Q9Y2L1 958 aaKnown RBP12.73□□□□□ -0.37
TRAK1-202ENST00000341421 MEIS1O00470 390 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 PPIP5K2O43314 1243 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 PPP1R37O75864 691 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 CCDC63Q8NA47 563 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 CSRNP1Q96S65 589 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 BACH1O14867 736 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 ZBED4O75132 1171 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 GAS8O95995 478 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 QRICH1Q2TAL8 776 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 RCSD1Q6JBY9 416 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 MAEAQ7L5Y9 396 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 OTUD6AQ7L8S5 288 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 FRMD5Q7Z6J6 570 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 A0A087X0B3 334 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 POTEB3A0JP26 581 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 POTECB2RU33 542 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 CLTAP09496 248 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 KLRK1P26718 216 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 SLC7A5Q01650 507 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 BIRC3Q13489 604 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 POTEBQ6S5H4 581 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 ZNF365Q70YC5 407 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 TRAPPC11Q7Z392 1133 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 JDP2Q8WYK2 163 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.73□□□□□ -0.372e-7■■■■■ 64.2
TRAK1-202ENST00000341421 CALR3Q96L12 384 aaKnown RBP12.73□□□□□ -0.37
TRAK1-202ENST00000341421 ZNF577Q9BSK1 485 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 INTS13Q9NVM9 706 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 DAGLAQ9Y4D2 1042 aa12.73□□□□□ -0.37
TRAK1-202ENST00000341421 SLMAPQ14BN4 828 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 PLCB4Q15147 1175 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 EDRF1Q3B7T1 1238 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 NKIRAS1Q9NYS0 192 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 SEL1LQ9UBV2 794 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 USP17L15C9J2P7 530 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 USP17L13C9JLJ4 530 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 USP17L11C9JVI0 530 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 USP17L18D6R9N7 530 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 USP17L22D6RA61 530 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 USP17L17D6RBQ6 530 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 USP17L19D6RCP7 530 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 USP17L20D6RJB6 530 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 H0YCG3 227 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 PRPF6O94906 941 aaKnown RBP12.72□□□□□ -0.37
TRAK1-202ENST00000341421 SCP2P22307 547 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 CRKP46108 304 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 USP17L24Q0WX57 530 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 NFRKBQ6P4R8 1299 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 USP17L6PQ6QN14 398 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 LARGE2Q8N3Y3 721 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 TBC1D16Q8TBP0 767 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 ZNF473Q8WTR7 871 aaKnown RBP12.72□□□□□ -0.37
TRAK1-202ENST00000341421 SYN2Q92777 582 aaPredicted RBP12.72□□□□□ -0.37
TRAK1-202ENST00000341421 ASIC3Q9UHC3 531 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 TBX3O15119 743 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 CLIC2O15247 247 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 RGS16O15492 202 aaPredicted RBP12.72□□□□□ -0.37
TRAK1-202ENST00000341421 SYF2O95926 243 aaKnown RBP12.72□□□□□ -0.37
TRAK1-202ENST00000341421 NR3C1P04150 777 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 ATP11AP98196 1134 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 HIBCHQ6NVY1 386 aaPredicted RBP12.72□□□□□ -0.37
TRAK1-202ENST00000341421 SFR1Q86XK3 245 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 SAAL1Q96ER3 474 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 TCHPQ9BT92 498 aa12.72□□□□□ -0.37
TRAK1-202ENST00000341421 FAM205AQ6ZU69 1335 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 NDC80O14777 642 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.37
TRAK1-202ENST00000341421 STRN3Q13033 797 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 TMEM139Q8IV31 216 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 KCTD17Q8N5Z5 321 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 GFPT2O94808 682 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 VIMP08670 466 aaKnown RBP12.71□□□□□ -0.37
TRAK1-202ENST00000341421 LSP1P33241 339 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 AOC3Q16853 763 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 PAPD7Q5XG87 772 aaKnown RBP12.71□□□□□ -0.37
TRAK1-202ENST00000341421 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 FAM160B2Q86V87 743 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 LMNTD2Q8IXW0 634 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 ACCSQ96QU6 501 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 DPH5Q9H2P9 285 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 TRIM10Q9UDY6 481 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 DAAM1Q9Y4D1 1078 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 IKBKGQ9Y6K9 419 aa12.71□□□□□ -0.37
TRAK1-202ENST00000341421 PDXKO00764 312 aa12.71□□□□□ -0.38
TRAK1-202ENST00000341421 MYCLP12524 364 aaPredicted RBP12.71□□□□□ -0.38
TRAK1-202ENST00000341421 SLC18A3Q16572 532 aa12.71□□□□□ -0.38
TRAK1-202ENST00000341421 NLRX1Q86UT6 975 aa12.71□□□□□ -0.38
TRAK1-202ENST00000341421 CPXCR1Q8N123 301 aa12.71□□□□□ -0.38
TRAK1-202ENST00000341421 MMGT1Q8N4V1 131 aa12.71□□□□□ -0.38
TRAK1-202ENST00000341421 PRPF38AQ8NAV1 312 aaKnown RBP12.71□□□□□ -0.38
TRAK1-202ENST00000341421 CCT8L2Q96SF2 557 aa12.71□□□□□ -0.38
TRAK1-202ENST00000341421 NFU1Q9UMS0 254 aa12.71□□□□□ -0.38
TRAK1-202ENST00000341421 LUC7L3O95232 432 aaKnown RBP12.71□□□□□ -0.38
TRAK1-202ENST00000341421 GDF11O95390 407 aa12.71□□□□□ -0.38
TRAK1-202ENST00000341421 FGRP09769 529 aa12.71□□□□□ -0.38
TRAK1-202ENST00000341421 PRLRP16471 622 aa12.71□□□□□ -0.38
TRAK1-202ENST00000341421 GUCY1A3Q02108 690 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms