RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PPP1R14CQ8TAE6 165 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 KIAA1524Q8TCG1 905 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 PPP1R9BQ96SB3 815 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 BCL9LQ86UU0 1499 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 A0A087WWV3 80 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 MAFGO15525 162 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 ERVK-9P63128 1117 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 ERVK-24P63145 666 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 EXOC3L4Q17RC7 722 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 APOBEC3HQ6NTF7 200 aaKnown RBP13.97□□□□□ -0.17
LIN54-201ENST00000340417 U2AF1L4Q8WU68 220 aaKnown RBP13.97□□□□□ -0.17
LIN54-201ENST00000340417 JMJD4Q9H9V9 463 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 SLIT2O94813 1529 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 ADORA2AP29274 412 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 FANCCQ00597 558 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 SGMS1Q86VZ5 419 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 SHCBP1Q8NEM2 672 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 GABPB2Q8TAK5 448 aaPredicted RBP13.96□□□□□ -0.17
LIN54-201ENST00000340417 WNK4Q96J92 1243 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 CPSF3Q9UKF6 684 aaKnown RBP13.96□□□□□ -0.17
LIN54-201ENST00000340417 POTECB2RU33 542 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 HBP1O60381 514 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 AKR1A1P14550 325 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 ERCC5P28715 1186 aaPredicted RBP13.96□□□□□ -0.17
LIN54-201ENST00000340417 NDUFA8P51970 172 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 ORC2Q13416 577 aaPredicted RBP13.96□□□□□ -0.17
LIN54-201ENST00000340417 ZNF667Q5HYK9 610 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 CCDC122Q5T0U0 273 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 CCDC186Q7Z3E2 898 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 BBXQ8WY36 941 aaPredicted RBP13.96□□□□□ -0.17
LIN54-201ENST00000340417 FAM81BQ96LP2 452 aa13.96□□□□□ -0.17
LIN54-201ENST00000340417 C16orf45Q96MC5 204 aaPredicted RBP13.96□□□□□ -0.17
LIN54-201ENST00000340417 NDC80O14777 642 aa13.96□□□□□ -0.18
LIN54-201ENST00000340417 UQCRHP07919 91 aa13.96□□□□□ -0.18
LIN54-201ENST00000340417 ATP2A2P16615 1042 aaKnown RBP13.96□□□□□ -0.18
LIN54-201ENST00000340417 DEFB128Q7Z7B8 93 aa13.96□□□□□ -0.18
LIN54-201ENST00000340417 TRIML1Q8N9V2 468 aa13.96□□□□□ -0.18
LIN54-201ENST00000340417 YME1L1Q96TA2 773 aa13.96□□□□□ -0.18
LIN54-201ENST00000340417 SRPRBQ9Y5M8 271 aaKnown RBP13.96□□□□□ -0.18
LIN54-201ENST00000340417 BRD1O95696 1058 aa13.96□□□□□ -0.18
LIN54-201ENST00000340417 IDI2Q9BXS1 227 aa13.96□□□□□ -0.18
LIN54-201ENST00000340417 PPP1R12CQ9BZL4 782 aa13.96□□□□□ -0.18
LIN54-201ENST00000340417 SENP6Q9GZR1 1112 aaPredicted RBP13.96□□□□□ -0.18
LIN54-201ENST00000340417 IRF6O14896 467 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 PTPRAP18433 802 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 CIITAP33076 1130 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 EFNA5P52803 228 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 NSFP46459 744 aaKnown RBP13.95□□□□□ -0.18
LIN54-201ENST00000340417 PSMD2Q13200 908 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 MXD4Q14582 209 aaPredicted RBP13.95□□□□□ -0.18
LIN54-201ENST00000340417 KYAT1Q16773 422 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 CYP26C1Q6V0L0 522 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 KIAA1586Q9HCI6 787 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 PDS5AQ29RF7 1337 aaKnown RBP13.95□□□□□ -0.18
LIN54-201ENST00000340417 SLIT3O75094 1523 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 POTEFA5A3E0 1075 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 SPDYE16A6NNV3 312 aaPredicted RBP13.95□□□□□ -0.18
LIN54-201ENST00000340417 E9PMD0 336 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 CHGBP05060 677 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 TCF7P36402 384 aaPredicted RBP13.95□□□□□ -0.18
LIN54-201ENST00000340417 PPP2R5DQ14738 602 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 POTEGQ6S5H5 508 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 POTEEQ6S8J3 1075 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 PPP1R21Q6ZMI0 780 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 SMAP1Q8IYB5 467 aaPredicted RBP13.95□□□□□ -0.18
LIN54-201ENST00000340417 BBS5Q8N3I7 341 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 NKRFO15226 690 aaKnown RBP eCLIP13.95□□□□□ -0.181e-13■□□□□ 11
LIN54-201ENST00000340417 MYL1P05976 194 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 MXRA8Q9BRK3 442 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 IQCGQ9H095 443 aaKnown RBP13.95□□□□□ -0.18
LIN54-201ENST00000340417 LZTFL1Q9NQ48 299 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 KIAA1468Q9P260 1216 aa13.95□□□□□ -0.18
LIN54-201ENST00000340417 ONECUT3O60422 494 aaPredicted RBP13.94□□□□□ -0.18
LIN54-201ENST00000340417 GADD45BO75293 160 aaPredicted RBP13.94□□□□□ -0.18
LIN54-201ENST00000340417 RNF8O76064 485 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 PRKCBP05771 671 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 ITGA4P13612 1032 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 CC2D1AQ6P1N0 951 aaPredicted RBP13.94□□□□□ -0.18
LIN54-201ENST00000340417 OXER1Q8TDS5 423 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 PPM1EQ8WY54 764 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 SEPT8Q92599 483 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 A6NJR5 290 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 KCNA4P22459 653 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 MXI1P50539 228 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 TOB2Q14106 344 aaPredicted RBP13.94□□□□□ -0.18
LIN54-201ENST00000340417 IQCDQ96DY2 449 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 KIF12Q96FN5 646 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 PDGFDQ9GZP0 370 aaPredicted RBP13.94□□□□□ -0.18
LIN54-201ENST00000340417 CRY2Q49AN0 593 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 ACAP3Q96P50 834 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 MSCO60682 206 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 AFPP02771 609 aaKnown RBP13.94□□□□□ -0.18
LIN54-201ENST00000340417 POLR2FP61218 127 aaKnown RBP13.94□□□□□ -0.18
LIN54-201ENST00000340417 NME8Q8N427 588 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 GMCL1P1Q8NEA9 526 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 EEF2KMTQ96G04 330 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 EFCAB12Q6NXP0 572 aa13.94□□□□□ -0.18
LIN54-201ENST00000340417 BAG1Q99933 345 aaPredicted RBP13.94□□□□□ -0.18
LIN54-201ENST00000340417 FAM213AQ9BRX8 229 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms