RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 STKLD1Q8NE28 680 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 OR2W6PQ8NHA6 318 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 NEK9Q8TD19 979 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 AZIN2Q96A70 460 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 FMO2Q99518 471 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 MIS12Q9H081 205 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 POLD4Q9HCU8 107 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 PARP2Q9UGN5 583 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 ATAD5Q96QE3 1844 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 A0A0A6YYK5 440 aaPredicted RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 RGS16O15492 202 aaPredicted RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 PYGLP06737 847 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 PLEKP08567 350 aaPredicted RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 SKIP12755 728 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 GNAT2P19087 354 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 CD151P48509 253 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 OCRLQ01968 901 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 KPNB1Q14974 876 aaKnown RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 CENPPQ6IPU0 288 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 TMEM154Q6P9G4 183 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 SYCE1Q8N0S2 351 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 SPICE1Q8N0Z3 855 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 ATP8B4Q8TF62 1192 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 DNAJC9Q8WXX5 260 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 PTPRN2Q92932 1015 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 SYT15Q9BQS2 421 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 DCLRE1BQ9H816 532 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.12□□□□□ -0.95
SKA2-201ENST00000330137 PNMA2Q9UL42 364 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 TRPM3Q9HCF6 1732 aaPredicted RBP9.11□□□□□ -0.95
SKA2-201ENST00000330137 MAGEA13PA6NCF6 341 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 LRRC53A6NM62 1247 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 TRAFD1O14545 582 aaPredicted RBP9.11□□□□□ -0.95
SKA2-201ENST00000330137 RANBP1P43487 201 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 ZC3H6P61129 1189 aaKnown RBP9.11□□□□□ -0.95
SKA2-201ENST00000330137 AMPD3Q01432 767 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 DENND2CQ68D51 928 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 CNNM4Q6P4Q7 775 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 ZNF790Q6PG37 636 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 MPRIPQ6WCQ1 1025 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 KCNH5Q8NCM2 988 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 TBC1D5Q92609 795 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 AK8Q96MA6 479 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 PSMB7Q99436 277 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 C7orf25Q9BPX7 421 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 ZMYND12Q9H0C1 365 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 QTRT2Q9H974 415 aaKnown RBP9.11□□□□□ -0.95
SKA2-201ENST00000330137 IL1RAPL1Q9NZN1 696 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 STOML1Q9UBI4 398 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 BLOC1S6Q9UL45 172 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 INTUQ9ULD6 942 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 BZW2Q9Y6E2 419 aaKnown RBP9.11□□□□□ -0.95
SKA2-201ENST00000330137 SCN11AQ9UI33 1791 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 CCDC166P0CW27 439 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 ZBTB48P10074 688 aaPredicted RBP9.11□□□□□ -0.95
SKA2-201ENST00000330137 PYGBP11216 843 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 SLC1A4P43007 532 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 LRRC63Q05C16 580 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 TMED1Q13445 227 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 DHX34Q14147 1143 aaKnown RBP9.11□□□□□ -0.95
SKA2-201ENST00000330137 CNGA2Q16280 664 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 PKN1Q16512 942 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 C1QTNF12Q5T7M4 302 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 ACBD5Q5T8D3 534 aaPredicted RBP9.11□□□□□ -0.95
SKA2-201ENST00000330137 MFSD6Q6ZSS7 791 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 KLHL7Q8IXQ5 586 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 ZNF654Q8IZM8 581 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 IRGQQ8WZA9 623 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 RUNDC3BQ96NL0 473 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 NR1H4Q96RI1 486 aaPredicted RBP9.11□□□□□ -0.95
SKA2-201ENST00000330137 FAM167BQ9BTA0 163 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 USP40Q9NVE5 1235 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 SUCLA2Q9P2R7 463 aaPredicted RBP9.11□□□□□ -0.95
SKA2-201ENST00000330137 ATP6V0A2Q9Y487 856 aa9.11□□□□□ -0.95
SKA2-201ENST00000330137 DCDC2CA8MYV0 355 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 PEX11AO75192 247 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 PMS2P54278 862 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 POU5F1Q01860 360 aaKnown RBP9.1□□□□□ -0.95
SKA2-201ENST00000330137 SFMBT2Q5VUG0 894 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 RRAGAQ7L523 313 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 SLFN11Q7Z7L1 901 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 PRMT1Q99873 361 aaKnown RBP9.1□□□□□ -0.95
SKA2-201ENST00000330137 NEUROG2Q9H2A3 272 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 PRDM11Q9NQV5 511 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 KLHL14Q9P2G3 628 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 COMMD3-BMI1R4GMX3 469 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 AKAP11Q9UKA4 1901 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 NUP188Q5SRE5 1749 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 SPDYE5A6NIY4 337 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 BUB1O43683 1085 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 SNRPA1P09661 255 aaKnown RBP9.1□□□□□ -0.95
SKA2-201ENST00000330137 PCP11498 1178 aaKnown RBP9.1□□□□□ -0.95
SKA2-201ENST00000330137 VHLP40337 213 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 KLK7P49862 253 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 RAD23BP54727 409 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 GFPT1Q06210 699 aaPredicted RBP9.1□□□□□ -0.95
SKA2-201ENST00000330137 EHHADHQ08426 723 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 TRADDQ15628 312 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 TMEM132AQ24JP5 1023 aa9.1□□□□□ -0.95
SKA2-201ENST00000330137 ANKRD40Q6AI12 368 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms