RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ARHGEF9O43307 516 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 DTNBO60941 627 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 CHN1P15882 459 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 GRAMD1CQ8IYS0 662 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 SPC25Q9HBM1 224 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 CEP72Q9P209 647 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 DYTNA2CJ06 578 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 TTI1O43156 1089 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 LARGE1O95461 756 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 IFNB1P01574 187 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 MYBL2P10244 700 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 FAM186BQ8IYM0 893 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 UPF3AQ9H1J1 476 aaKnown RBP7.58□□□□□ -1.2
SMC1A-201ENST00000322213 C15orf41Q9Y2V0 281 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 ORC4O43929 436 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 MARK3P27448 753 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 FKBP3Q00688 224 aaKnown RBP7.58□□□□□ -1.2
SMC1A-201ENST00000322213 SLFN12Q8IYM2 578 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 KIAA2013Q8IYS2 634 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 SH2D3CQ8N5H7 860 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 MCM9Q9NXL9 1143 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 CA4P22748 312 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 RPS6KA3P51812 740 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 TRAPPC11Q7Z392 1133 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 FAM133AQ8N9E0 248 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 SMYD3Q9H7B4 428 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 CAPN11Q9UMQ6 739 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 IQCA1LA6NCM1 817 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 SGK1O00141 431 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 STAM2O75886 525 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 ATP6V1G2O95670 118 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 SERPINB4P48594 390 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 RGS9BPQ6ZS82 235 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 GPBP1Q86WP2 473 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.58□□□□□ -1.2
SMC1A-201ENST00000322213 SH2D4AQ9H788 454 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 CORO1CQ9ULV4 474 aaPredicted RBP7.58□□□□□ -1.2
SMC1A-201ENST00000322213 ZNF532Q9HCE3 1301 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 M0R2C6 588 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 KRT39Q6A163 491 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 THEMISQ8N1K5 641 aaPredicted RBP7.58□□□□□ -1.2
SMC1A-201ENST00000322213 MIGA1Q8NAN2 632 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 ZKSCAN4Q969J2 545 aaPredicted RBP7.58□□□□□ -1.2
SMC1A-201ENST00000322213 FAM96AQ9H5X1 160 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 NEURL1BA8MQ27 555 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 EYA2O00167 538 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 FGAP02671 866 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 HSPA8P11142 646 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 MRPS9P82933 396 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CYB5RLQ6IPT4 315 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 MROH5Q6ZUA9 1318 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 NQO1P15559 274 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 ATICP31939 592 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 ADCY7P51828 1080 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CCNHP51946 323 aaPredicted RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CYP27A1Q02318 531 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 RSBN1LQ6PCB5 846 aaPredicted RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CCNI2Q6ZMN8 369 aaPredicted RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 RBM43Q6ZSC3 357 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 PARD3BQ8TEW8 1205 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 MAGEA13PA6NCF6 341 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 BTBD18B2RXH4 712 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 VCAM1P19320 739 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 INAQ16352 499 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 FSCBQ5H9T9 825 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 IFNL2Q8IZJ0 200 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CASP10Q92851 521 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 SLC39A2Q9NP94 309 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CCDC159P0C7I6 412 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 PPP1R2P3Q6NXS1 205 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CENPUQ71F23 418 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 PFDN4Q9NQP4 134 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 FBXL5Q9UKA1 691 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 ASAP2O43150 1006 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 PDHBP11177 359 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 IDI1Q13907 227 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 KLC3Q6P597 504 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 APOA5Q6Q788 366 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 SRRM1Q8IYB3 904 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 DBNDD2Q9BQY9 259 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 DISC1Q9NRI5 854 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 PITPNM2Q9BZ72 1349 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 NSFP46459 744 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 INPP1P49441 399 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 DDR1Q08345 913 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 NONOQ15233 471 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 RPS6KA2Q15349 733 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CYP4F22Q6NT55 531 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 RNPC3Q96LT9 517 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 TRAPPC9Q96Q05 1148 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 TRIM56Q9BRZ2 755 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 UTP6Q9NYH9 597 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 SCHIP1Q9P0W5 487 aaPredicted RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 KIDINS220Q9ULH0 1771 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CHRNA3P32297 505 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 ZMYM1Q5SVZ6 1142 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 LARP4BQ92615 738 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CDKL2Q92772 493 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 SNF8Q96H20 258 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 NDUFA13Q9P0J0 144 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms