RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SYTL5Q8TDW5 730 aaPredicted RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 TAAR1Q96RJ0 339 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 RIT2Q99578 217 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 DEF6Q9H4E7 631 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 MYO1AQ9UBC5 1043 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 SAMM50Q9Y512 469 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 DUSP10Q9Y6W6 482 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 ZHX2Q9Y6X8 837 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 RCCD1A6NED2 376 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 EIF3CLB5ME19 914 aaKnown RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 PDXKO00764 312 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 CLIC2O15247 247 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 KRT86O43790 486 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 ZBED4O75132 1171 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 TFRCP02786 760 aaKnown RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 HNRNPH3P31942 346 aaKnown RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 USP14P54578 494 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 MARSP56192 900 aaKnown RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 BACE1P56817 501 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 MRPS9P82933 396 aaKnown RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 CDK17Q00537 523 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 SPA17Q15506 151 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 ZC2HC1CQ53FD0 456 aaPredicted RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 TEX35Q5T0J7 233 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 B3GNT9Q6UX72 402 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 BAP1Q92560 729 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 ATG4CQ96DT6 458 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 WNK4Q96J92 1243 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 TRERF1Q96PN7 1200 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 PURBQ96QR8 312 aaKnown RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 EIF3CQ99613 913 aaKnown RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 NAPGQ99747 312 aaPredicted RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 IKZF4Q9H2S9 585 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 PARVGQ9HBI0 331 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 PICK1Q9NRD5 415 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 OLFML3Q9NRN5 406 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 GINM1Q9NU53 330 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 ARMCX3Q9UH62 379 aaPredicted RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 PUF60Q9UHX1 559 aaKnown RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 CDC23Q9UJX2 597 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 WDR90Q96KV7 1748 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 LTBP3Q9NS15 1303 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 VWA5AO00534 786 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 ENC1O14682 589 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 ZNF263O14978 683 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 CALUO43852 315 aaPredicted RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 AKAP3O75969 853 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 MYCLP12524 364 aaPredicted RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 POLR2FP61218 127 aaKnown RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 MTMR1Q13613 665 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 TKFCQ3LXA3 575 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 MAEAQ7L5Y9 396 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 MIER3Q7Z3K6 550 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 KSR1Q8IVT5 923 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 SCYL3Q8IZE3 742 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 ZNF280CQ8ND82 737 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 JAKMIP2Q96AA8 810 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 PCDHB13Q9Y5F0 798 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 RPTORQ8N122 1335 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 MACROD2A1Z1Q3 448 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 AKR1B10O60218 316 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 NOL4O94818 638 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 NR3C1P04150 777 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 BCRP11274 1271 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 GAP43P17677 238 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 PTPRAP18433 802 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 EIF4A3P38919 411 aaKnown RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 HMGCS2P54868 508 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 KIF5AQ12840 1032 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 ITGB3BPQ13352 177 aaPredicted RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 PRKG1Q13976 671 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 DCAF17Q5H9S7 520 aaPredicted RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 ODR4Q5SWX8 454 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 TCERG1LQ5VWI1 586 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 PCNX4Q63HM2 1172 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 RNF207Q6ZRF8 634 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 ZC3H3Q8IXZ2 948 aaKnown RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 TRPM4Q8TD43 1214 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 RMDN3Q96TC7 470 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 LSM14BQ9BX40 385 aaKnown RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 TYW1Q9NV66 732 aaKnown RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 FAM184BQ9ULE4 1060 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 RIPK3Q9Y572 518 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 ASTN1O14525 1302 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 ARHGEF35A5YM69 484 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 DHX15O43143 795 aaKnown RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 XRCC5P13010 732 aaKnown RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 RPL13P26373 211 aaKnown RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 CASP4P49662 377 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 KIF11P52732 1056 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 TDRD12Q587J7 1177 aaKnown RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 FAM178BQ8IXR5 827 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 SH2D3AQ9BRG2 576 aa8.33□□□□□ -1.08
IFT88-201ENST00000319980 IFIH1Q9BYX4 1025 aaKnown RBP8.33□□□□□ -1.08
IFT88-201ENST00000319980 TESPA1A2RU30 521 aaPredicted RBP8.32□□□□□ -1.08
IFT88-201ENST00000319980 TGFB1I1O43294 461 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 MUTP22033 750 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 CHMP4BP1P59074 171 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 CBX1P83916 185 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms