RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 EPOPA6NHQ4 379 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 RRN3P2A6NIE6 340 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 GJB5O95377 273 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 RBM25P49756 843 aaKnown RBP16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 IGBP1P78318 339 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 KRT76Q01546 638 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 TAP1Q03518 808 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 LPIN1Q14693 890 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 UGCGQ16739 394 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 INF2Q27J81 1249 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 SWSAP1Q6NVH7 229 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 POTEBQ6S5H4 581 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 SMAP1Q8IYB5 467 aaPredicted RBP16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 USP38Q8NB14 1042 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 RIT2Q99578 217 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 UNC45AQ9H3U1 944 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 PRDM12Q9H4Q4 367 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 ZNF302Q9NR11 478 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 PCDHA2Q9Y5H9 948 aa16.54■□□□□ 0.24
PPP1CA-201ENST00000312989 EIF5BO60841 1220 aaKnown RBP16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 STBD1O95210 358 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 NR5A1Q13285 461 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 NONOQ15233 471 aaKnown RBP eCLIP16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 FBXO47Q5MNV8 452 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 MIS18BP1Q6P0N0 1132 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 MTHFD1LQ6UB35 978 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 KRT25Q7Z3Z0 450 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 LINC01465Q8N7H1 131 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 AGO3Q9H9G7 860 aaKnown RBP16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 KCNMB3Q9NPA1 279 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 TRPC6Q9Y210 931 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 PCDHA10Q9Y5I2 948 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 XIRP2A4UGR9 3374 aa16.53■□□□□ 0.24
PPP1CA-201ENST00000312989 SMIM35A0A1B0GVV1 85 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 WNT7AO00755 349 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 HBP1O60381 514 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 C22orf31O95567 290 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 GHRP10912 638 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 FOSL2P15408 326 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 IKBKEQ14164 716 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 PPP2R2DQ66LE6 453 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 PDXDC2PQ6P474 469 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 LINC01599Q8WXQ3 324 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 CEP89Q96ST8 783 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 SLC28A3Q9HAS3 691 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 CDY2AQ9Y6F7 541 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 COL4A6Q14031 1691 aa16.52■□□□□ 0.24
PPP1CA-201ENST00000312989 COL1A2P08123 1366 aa16.52■□□□□ 0.23
PPP1CA-201ENST00000312989 KDM3AQ9Y4C1 1321 aa16.52■□□□□ 0.23
PPP1CA-201ENST00000312989 WDR64B1ANS9 1081 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 BACH1O14867 736 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 EFCAB14O75071 495 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 KCNJ6P48051 423 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 MRPS6P82932 125 aaKnown RBP16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 HTRA4P83105 476 aaPredicted RBP16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 LRCH2Q5VUJ6 765 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 KIAA0319LQ8IZA0 1049 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 MAFAQ8NHW3 353 aaPredicted RBP16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 HAS1Q92839 578 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 IFIH1Q9BYX4 1025 aaKnown RBP16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 FAM49AQ9H0Q0 323 aaPredicted RBP16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 DISC1Q9NRI5 854 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 GABBR1Q9UBS5 961 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 VAV3Q9UKW4 847 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 PSAPP07602 524 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 KLRC1P26715 233 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 FAM160B1Q5W0V3 765 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 PPP4R3AQ6IN85 833 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 PIK3AP1Q6ZUJ8 805 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 NEK8Q86SG6 692 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 CRIPAKQ8N1N5 446 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 SP7Q8TDD2 431 aaPredicted RBP16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 BBXQ8WY36 941 aaPredicted RBP16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 SEPT8Q92599 483 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 RC3H2Q9HBD1 1191 aaKnown RBP16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 DDX25Q9UHL0 483 aaKnown RBP16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 LIMCH1Q9UPQ0 1083 aa16.51■□□□□ 0.23
PPP1CA-201ENST00000312989 RFXAPO00287 272 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 EML1O00423 815 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 TLL1O43897 1013 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 LPXNO60711 386 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 GAS7O60861 476 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 MMP1P03956 469 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 SPIRE1Q08AE8 756 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 TMEM62Q0P6H9 643 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 LETM2Q2VYF4 491 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 ZNF484Q5JVG2 852 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 TMEM40Q8WWA1 233 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 APBB2Q92870 758 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 TOP1MTQ969P6 601 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 RAD9AQ99638 391 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 CDHR5Q9HBB8 845 aa16.5■□□□□ 0.23
PPP1CA-201ENST00000312989 LINC01553A4QN01 128 aa16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 CHMP2AO43633 222 aa16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 LINC00271P0C7V0 271 aa16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 PRKCEQ02156 737 aa16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 TARBP2Q15633 366 aaKnown RBP16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 KRT40Q6A162 431 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms