RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 MXRA8Q9BRK3 442 aa13.93□□□□□ -0.18
TPT1-201ENST00000309246 C11orf84Q9BUA3 381 aaPredicted RBP13.93□□□□□ -0.18
TPT1-201ENST00000309246 AZI2Q9H6S1 392 aa13.93□□□□□ -0.18
TPT1-201ENST00000309246 KCNH7Q9NS40 1196 aa13.93□□□□□ -0.18
TPT1-201ENST00000309246 RWDD3Q9Y3V2 267 aa13.93□□□□□ -0.18
TPT1-201ENST00000309246 MAFGO15525 162 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 RB1P06400 928 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 ARP10275 920 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 ACTR2P61160 394 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 PLCB4Q15147 1175 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 SYNE3Q6ZMZ3 975 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 CLP1Q92989 425 aaKnown RBP13.92□□□□□ -0.18
TPT1-201ENST00000309246 ZNF689Q96CS4 500 aaPredicted RBP13.92□□□□□ -0.18
TPT1-201ENST00000309246 SDF4Q9BRK5 362 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 ANO3Q9BYT9 981 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 LMAN2LQ9H0V9 348 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 RIC8AQ9NPQ8 531 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 TRPV2Q9Y5S1 764 aa13.92□□□□□ -0.18
TPT1-201ENST00000309246 NFASCO94856 1347 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 M0QZ92 97 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 DGKIO75912 1065 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 LTBRP36941 435 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 ADCY7P51828 1080 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 HYAL1Q12794 435 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 ITGB3BPQ13352 177 aaPredicted RBP13.91□□□□□ -0.18
TPT1-201ENST00000309246 CLUL1Q15846 466 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 RTN1Q16799 776 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 IER5Q5VY09 327 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 RTN4RL1Q86UN2 441 aaPredicted RBP13.91□□□□□ -0.18
TPT1-201ENST00000309246 ALG13Q9NP73 1137 aaKnown RBP13.91□□□□□ -0.18
TPT1-201ENST00000309246 RBM28Q9NW13 759 aaKnown RBP13.91□□□□□ -0.18
TPT1-201ENST00000309246 TMEM260Q9NX78 707 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 BRPF3Q9ULD4 1205 aa13.91□□□□□ -0.18
TPT1-201ENST00000309246 MRPL42Q9Y6G3 142 aaKnown RBP13.91□□□□□ -0.18
TPT1-201ENST00000309246 DDX39AO00148 427 aaKnown RBP13.9□□□□□ -0.18
TPT1-201ENST00000309246 STXBP3O00186 592 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 GALR2O43603 387 aaPredicted RBP13.9□□□□□ -0.18
TPT1-201ENST00000309246 MMP1P03956 469 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 RPLP2P05387 115 aaKnown RBP13.9□□□□□ -0.18
TPT1-201ENST00000309246 GTF2F1P35269 517 aaKnown RBP eCLIP13.9□□□□□ -0.187e-8■■□□□ 11.8
TPT1-201ENST00000309246 STAT5BP51692 787 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 ZP2Q05996 745 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 DLX2Q07687 328 aaPredicted RBP13.9□□□□□ -0.18
TPT1-201ENST00000309246 FUT2Q10981 343 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 PAK2Q13177 524 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 PAN2Q504Q3 1202 aaKnown RBP13.9□□□□□ -0.18
TPT1-201ENST00000309246 CEP55Q53EZ4 464 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 PPP1R18Q6NYC8 613 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 PLPPR4Q7Z2D5 763 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 SKAP1Q86WV1 359 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 NEK1Q96PY6 1258 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 AGO4Q9HCK5 861 aaKnown RBP13.9□□□□□ -0.18
TPT1-201ENST00000309246 PADI3Q9ULW8 664 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 FAM50BQ9Y247 325 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 PCDHA2Q9Y5H9 948 aa13.9□□□□□ -0.18
TPT1-201ENST00000309246 V9GY48 417 aaPredicted RBP13.9□□□□□ -0.18
TPT1-201ENST00000309246 IGSF9BQ9UPX0 1349 aa13.9□□□□□ -0.19
TPT1-201ENST00000309246 POTEB3A0JP26 581 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 SMCO2A6NFE2 343 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 GOLGA8AA7E2F4 631 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 GOLGA8BA8MQT2 603 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 LINC01565O15544 149 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 ZBTB43O43298 467 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 TBX10O75333 385 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 FOSP01100 380 aaPredicted RBP13.89□□□□□ -0.19
TPT1-201ENST00000309246 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
TPT1-201ENST00000309246 GATMP50440 423 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 CAMK1Q14012 370 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 TMEM266Q2M3C6 531 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 CTC1Q2NKJ3 1217 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 RNF20Q5VTR2 975 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 POTEBQ6S5H4 581 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 NPAS4Q8IUM7 802 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 CMTR2Q8IYT2 770 aaKnown RBP13.89□□□□□ -0.19
TPT1-201ENST00000309246 TNPO1Q92973 898 aaKnown RBP13.89□□□□□ -0.19
TPT1-201ENST00000309246 PLVAPQ9BX97 442 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 FTHL17Q9BXU8 183 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 CELF4Q9BZC1 486 aaKnown RBP13.89□□□□□ -0.19
TPT1-201ENST00000309246 IGFLR1Q9H665 355 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 PLAGL2Q9UPG8 496 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 ARIH1Q9Y4X5 557 aaPredicted RBP13.89□□□□□ -0.19
TPT1-201ENST00000309246 SQORQ9Y6N5 450 aa13.89□□□□□ -0.19
TPT1-201ENST00000309246 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 SMIM35A0A1B0GVV1 85 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 PRR33A8MZF0 331 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 hCG_1984214I3L0E3 225 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 MEIS1O00470 390 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 BACH1O14867 736 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 NCK2O43639 380 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 ATG7O95352 703 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 CCNE2O96020 404 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 ITGB1P05556 798 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 SCG2P13521 617 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 ALADP13716 330 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 DNAJB1P25685 340 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 CDC27P30260 824 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 ZNF76P36508 570 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 SREBF1P36956 1147 aa13.88□□□□□ -0.19
TPT1-201ENST00000309246 CLK2P49760 499 aaKnown RBP13.88□□□□□ -0.19
TPT1-201ENST00000309246 KRT76Q01546 638 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms