RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 GOLGA6L9A6NEM1 432 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 FAM13AO94988 1023 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 GCNT3O95395 438 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 MUTP22033 750 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 HOXA7P31268 230 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 HOXD13P35453 343 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 FKBP3Q00688 224 aaKnown RBP24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 KCNA1Q09470 495 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 FSTL1Q12841 308 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 PROCA1Q8NCQ7 364 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 ASCC2Q9H1I8 757 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 ZSWIM4Q9H7M6 989 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 L2HGDHQ9H9P8 463 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 ARHGEF35A5YM69 484 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 FGFR1OPO95684 399 aaKnown RBP24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 CCDC175P0C221 793 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 FECHP22830 423 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 SYCP1Q15431 976 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 ANKRD7Q92527 254 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 INPP4AQ96PE3 977 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 TELO2Q9Y4R8 837 aa24.81■■□□□ 1.56
PDLIM2-202ENST00000308354 NMT1P30419 496 aaKnown RBP24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 KRT9P35527 623 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 MAP1SQ66K74 1059 aaPredicted RBP24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 EPM2AIP1Q7L775 607 aaPredicted RBP24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 NCAPG2Q86XI2 1143 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 NEK9Q8TD19 979 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 TCEAL9Q9UHQ7 104 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 ADGRG1Q9Y653 693 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 ASTN1O14525 1302 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 A0A1W2PQC6 194 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 TTC26A0AVF1 554 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 IQCA1LA6NCM1 817 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 CXCL11O14625 94 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 QARSP47897 775 aaKnown RBP24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 SP4Q02446 784 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 IKZF4Q9H2S9 585 aa24.8■■□□□ 1.56
PDLIM2-202ENST00000308354 KIF20AO95235 890 aa24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 ERVK-24P63145 666 aa24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 VWA3BQ502W6 1294 aa24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 XRRA1Q6P2D8 792 aa24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 NLRX1Q86UT6 975 aa24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 CHST13Q8NET6 341 aa24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 GPRASP2Q96D09 838 aa24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 PCMTD1Q96MG8 357 aaPredicted RBP24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 SPATC1LQ9H0A9 340 aa24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 PDCL3Q9H2J4 239 aa24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 NDST4Q9H3R1 872 aa24.79■■□□□ 1.56
PDLIM2-202ENST00000308354 HERVK_113P62684 666 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 KNOP1Q1ED39 458 aaKnown RBP24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 ZC2HC1CQ53FD0 456 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 UTP14CQ5TAP6 766 aaKnown RBP24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 ARMC9Q7Z3E5 817 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 KSR1Q8IVT5 923 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 PARVGQ9HBI0 331 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 V9GYY5 206 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 A0A0U1RQJ8 604 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 RASSF10A6NK89 507 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 SLU7O95391 586 aaKnown RBP24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 PPIL2Q13356 520 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 ADAM9Q13443 819 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 CCDC40Q4G0X9 1142 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 PADI6Q6TGC4 694 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 ATRIPQ8WXE1 791 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 WDR24Q96S15 920 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 MAP7D2Q96T17 732 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 KCNH4Q9UQ05 1017 aa24.78■■□□□ 1.56
PDLIM2-202ENST00000308354 WDR64B1ANS9 1081 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 GNG11P61952 73 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 MAN2A1Q16706 1144 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 MTERF4Q7Z6M4 381 aaKnown RBP24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 RIOX2Q8IUF8 465 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 CCDC155Q8N6L0 562 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 OLFML3Q9NRN5 406 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 AGTPBP1Q9UPW5 1226 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 KCNA2P16389 499 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 GAP43P17677 238 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 YWHABP31946 246 aaKnown RBP24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 GJA5P36382 358 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 KRT76Q01546 638 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 MOGSQ13724 837 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 FKBP15Q5T1M5 1219 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 FOXR2Q6PJQ5 311 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 TMTC1Q8IUR5 882 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 TXNRD2Q9NNW7 524 aa24.77■■□□□ 1.56
PDLIM2-202ENST00000308354 GRIN3BO60391 1043 aa24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 HIP1RO75146 1068 aa24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 NR2F2P24468 414 aa24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 RARRES1P49788 294 aa24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 MOV10L1Q9BXT6 1211 aaKnown RBP24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 LZTFL1Q9NQ48 299 aa24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 CNMDO75829 334 aa24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 TRIM21P19474 475 aaKnown RBP24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 ODR4Q5SWX8 454 aa24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 CYP26C1Q6V0L0 522 aa24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 PNMA8AQ86V59 439 aaPredicted RBP24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 DAW1Q8N136 415 aa24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 ERO1AQ96HE7 468 aa24.76■■□□□ 1.55
PDLIM2-202ENST00000308354 AGPAT5Q9NUQ2 364 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms