RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 FBXO25Q8TCJ0 367 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 CNKSR1Q969H4 720 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 CDK5RAP3Q96JB5 506 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 LSM14BQ9BX40 385 aaKnown RBP15.65■□□□□ 0.1
CDT1-201ENST00000301019 ZNF232Q9UNY5 417 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 AFF2P51816 1311 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 MYH7BA7E2Y1 1941 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.65■□□□□ 0.1
CDT1-201ENST00000301019 SPTY2D1Q68D10 685 aaPredicted RBP15.65■□□□□ 0.1
CDT1-201ENST00000301019 DCAF5Q96JK2 942 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 ADAM7Q9H2U9 754 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 MMADHCQ9H3L0 296 aaPredicted RBP15.65■□□□□ 0.1
CDT1-201ENST00000301019 THAP9Q9H5L6 903 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 DISC1Q9NRI5 854 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 CNNM1Q9NRU3 951 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 GALNT8Q9NY28 637 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 WDR35Q9P2L0 1181 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 UTP11Q9Y3A2 253 aaKnown RBP15.65■□□□□ 0.1
CDT1-201ENST00000301019 USP15Q9Y4E8 981 aaPredicted RBP15.65■□□□□ 0.1
CDT1-201ENST00000301019 TLR2O60603 784 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 PRLRP16471 622 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 ADD2P35612 726 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 KLHL30Q0D2K2 578 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 KCNMA1Q12791 1236 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 INF2Q27J81 1249 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 RABL6Q3YEC7 729 aaPredicted RBP15.64■□□□□ 0.09
CDT1-201ENST00000301019 GALNT17Q6IS24 598 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 FBXL16Q8N461 479 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 SPOCK2Q92563 424 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 ARHGEF2Q92974 986 aaKnown RBP15.64■□□□□ 0.09
CDT1-201ENST00000301019 RNF25Q96BH1 459 aaPredicted RBP15.64■□□□□ 0.09
CDT1-201ENST00000301019 ERP27Q96DN0 273 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 PHACTR1Q9C0D0 580 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 ZMYND12Q9H0C1 365 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 CPVLQ9H3G5 476 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 SEPT11Q9NVA2 429 aaKnown RBP15.64■□□□□ 0.09
CDT1-201ENST00000301019 PKD1L3Q7Z443 1732 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 TMEM110-MUSTN1A8MSY1 372 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 FAM163BP0C2L3 166 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 VWA3BQ502W6 1294 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 LDHAL6AQ6ZMR3 332 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 MAIP1Q8WWC4 291 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 DNAJC9Q8WXX5 260 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 UTP4Q969X6 686 aaKnown RBP15.64■□□□□ 0.09
CDT1-201ENST00000301019 SEMA6BQ9H3T3 888 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 KCNMB3Q9NPA1 279 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 PCDH11XQ9BZA7 1347 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 PCDH11YQ9BZA8 1340 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 N4BP2Q86UW6 1770 aaPredicted RBP15.64■□□□□ 0.09
CDT1-201ENST00000301019 PFDN1O60925 122 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 ZFYP08048 801 aaPredicted RBP15.64■□□□□ 0.09
CDT1-201ENST00000301019 PLCG1P19174 1290 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 SLC9C1Q4G0N8 1177 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 PIGWQ7Z7B1 504 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 TSPYL2Q9H2G4 693 aaPredicted RBP15.64■□□□□ 0.09
CDT1-201ENST00000301019 SLC52A2Q9HAB3 445 aa15.64■□□□□ 0.09
CDT1-201ENST00000301019 KCNA3P22001 575 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 TNFRSF8P28908 595 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 ATP2C1P98194 919 aaPredicted RBP15.63■□□□□ 0.09
CDT1-201ENST00000301019 ITIH3Q06033 890 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 CERKLQ49MI3 558 aaPredicted RBP15.63■□□□□ 0.09
CDT1-201ENST00000301019 FAM47AQ5JRC9 791 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 MEI1Q5TIA1 1274 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 OLFML2BQ68BL8 750 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 LRIG3Q6UXM1 1119 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 PEX26Q7Z412 305 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 SGMS1Q86VZ5 419 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 LCORLQ8N3X6 602 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 RAB17Q9H0T7 212 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 TBC1D2BQ9UPU7 963 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 ADAMTS7Q9UKP4 1686 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.63■□□□□ 0.09
CDT1-201ENST00000301019 SUN1O94901 812 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 GBP1P32455 592 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 RIPK1Q13546 671 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 SFMBT2Q5VUG0 894 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 ARMC9Q7Z3E5 817 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 KIFAP3Q92845 792 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 DNAAF2Q9NVR5 837 aaKnown RBP15.63■□□□□ 0.09
CDT1-201ENST00000301019 ASAP1Q9ULH1 1129 aa15.63■□□□□ 0.09
CDT1-201ENST00000301019 PARP4Q9UKK3 1724 aaKnown RBP15.62■□□□□ 0.09
CDT1-201ENST00000301019 HNRNPRO43390 633 aaKnown RBP15.62■□□□□ 0.09
CDT1-201ENST00000301019 PLCG2P16885 1265 aa15.62■□□□□ 0.09
CDT1-201ENST00000301019 GCLCP48506 637 aaPredicted RBP15.62■□□□□ 0.09
CDT1-201ENST00000301019 VPS41P49754 854 aa15.62■□□□□ 0.09
CDT1-201ENST00000301019 IFI16Q16666 785 aaKnown RBP15.62■□□□□ 0.09
CDT1-201ENST00000301019 GIGYF2Q6Y7W6 1299 aaKnown RBP15.62■□□□□ 0.09
CDT1-201ENST00000301019 DTHD1Q6ZMT9 781 aa15.62■□□□□ 0.09
CDT1-201ENST00000301019 SH3RF3Q8TEJ3 882 aaPredicted RBP15.62■□□□□ 0.09
CDT1-201ENST00000301019 DNAJC1Q96KC8 554 aaKnown RBP15.62■□□□□ 0.09
CDT1-201ENST00000301019 STRBPQ96SI9 672 aaKnown RBP15.62■□□□□ 0.09
CDT1-201ENST00000301019 CWC25Q9NXE8 425 aaPredicted RBP15.62■□□□□ 0.09
CDT1-201ENST00000301019 KLRC4O43908 158 aa15.62■□□□□ 0.09
CDT1-201ENST00000301019 MYL1P05976 194 aa15.62■□□□□ 0.09
CDT1-201ENST00000301019 KCNQ4P56696 695 aa15.62■□□□□ 0.09
CDT1-201ENST00000301019 ANKS1AQ92625 1134 aa15.62■□□□□ 0.09
CDT1-201ENST00000301019 IFT74Q96LB3 600 aa15.62■□□□□ 0.09
CDT1-201ENST00000301019 NDNQ99608 321 aa15.62■□□□□ 0.09
CDT1-201ENST00000301019 NSRP1Q9H0G5 558 aaKnown RBP15.62■□□□□ 0.09
CDT1-201ENST00000301019 TMOD4Q9NZQ9 345 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms