RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 VWA3BQ502W6 1294 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 PROCA1Q8NCQ7 364 aaPredicted RBP28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 SPATC1LQ9H0A9 340 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 AGPAT5Q9NUQ2 364 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 KCNH4Q9UQ05 1017 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 A0A1W2PQC6 194 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 ARHGEF35A5YM69 484 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 KRT9P35527 623 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 QARSP47897 775 aaKnown RBP28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 KCNJ6P48051 423 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 MAPK7Q13164 816 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 PADI6Q6TGC4 694 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 NDST4Q9H3R1 872 aa28.35■■■□□ 2.13
SDCCAG3-201ENST00000298537 ERVK-24P63145 666 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 SP2Q02086 613 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 PTPN14Q15678 1187 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 Q3C1V9 767 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 PLA2G4FQ68DD2 849 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 REXO1L1PQ8IX06 675 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 EPHB6O15197 1021 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 HIP1RO75146 1068 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 MUTP22033 750 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 RARRES1P49788 294 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 KNOP1Q1ED39 458 aaKnown RBP28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 CNGA4Q8IV77 575 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 KCTD17Q8N5Z5 321 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 GPRASP2Q96D09 838 aa28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 MOV10L1Q9BXT6 1211 aaKnown RBP28.34■■■□□ 2.13
SDCCAG3-201ENST00000298537 CXCL11O14625 94 aa28.33■■■□□ 2.13
SDCCAG3-201ENST00000298537 PPIL2Q13356 520 aa28.33■■■□□ 2.13
SDCCAG3-201ENST00000298537 ADAM9Q13443 819 aa28.33■■■□□ 2.13
SDCCAG3-201ENST00000298537 RIOX2Q8IUF8 465 aa28.33■■■□□ 2.13
SDCCAG3-201ENST00000298537 NEK9Q8TD19 979 aa28.33■■■□□ 2.13
SDCCAG3-201ENST00000298537 TTYH3Q9C0H2 523 aa28.33■■■□□ 2.13
SDCCAG3-201ENST00000298537 PARVGQ9HBI0 331 aa28.33■■■□□ 2.13
SDCCAG3-201ENST00000298537 PPP2R2CQ9Y2T4 447 aa28.33■■■□□ 2.13
SDCCAG3-201ENST00000298537 A0A0G2JMZ2 1700 aa28.33■■■□□ 2.13
SDCCAG3-201ENST00000298537 NPEPPSP55786 919 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 NLRX1Q86UT6 975 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 CHST13Q8NET6 341 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 AGTPBP1Q9UPW5 1226 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 BACH1O14867 736 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 CLIC2O15247 247 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 NR2F2P24468 414 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 YWHABP31946 246 aaKnown RBP28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 MAN2A1Q16706 1144 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 CCDC40Q4G0X9 1142 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 GPIHBP1Q8IV16 184 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 SMCR8Q8TEV9 937 aaPredicted RBP28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 CHP1Q99653 195 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 OLFML3Q9NRN5 406 aa28.32■■■□□ 2.12
SDCCAG3-201ENST00000298537 ZMYM2Q9UBW7 1377 aa28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 USO1O60763 962 aaKnown RBP28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 MKRN3Q13064 507 aaKnown RBP28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 GPAT2Q6NUI2 795 aa28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 XRRA1Q6P2D8 792 aa28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 PCMTD1Q96MG8 357 aaPredicted RBP28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 RBPJLQ9UBG7 517 aa28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 WDR64B1ANS9 1081 aa28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 ZNF131P52739 623 aa28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 ARMC9Q7Z3E5 817 aa28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 GPRC5CQ9NQ84 441 aa28.31■■■□□ 2.12
SDCCAG3-201ENST00000298537 IQCA1LA6NCM1 817 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 SOWAHBA6NEL2 793 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 TGFB1I1O43294 461 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 TPM2P07951 284 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 ODR4Q5SWX8 454 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 LDLRAD1Q5T700 205 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 FGFR1OPO95684 399 aaKnown RBP28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 KRT76Q01546 638 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 FOXR2Q6PJQ5 311 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 ZC3H3Q8IXZ2 948 aaKnown RBP28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 ERGIC2Q96RQ1 377 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 TRAF3IP3Q9Y228 551 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 SIK3Q9Y2K2 1263 aa28.3■■■□□ 2.12
SDCCAG3-201ENST00000298537 ZNF862O60290 1169 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 PGK2P07205 417 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 TPM1P09493 284 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 GAP43P17677 238 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 TRIM21P19474 475 aaKnown RBP28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 GUCY2CP25092 1073 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 CASP4P49662 377 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 BMT2Q1RMZ1 405 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 ZNF526Q8TF50 670 aaPredicted RBP28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 FAM207AQ9NSI2 230 aaPredicted RBP28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 TCEAL9Q9UHQ7 104 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 ALDH5A1P51649 535 aaPredicted RBP28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 APBA1Q02410 837 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 SEPT14Q6ZU15 432 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 ZNF720Q7Z2F6 126 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 GABBR1Q9UBS5 961 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 CAPN11Q9UMQ6 739 aa28.29■■■□□ 2.12
SDCCAG3-201ENST00000298537 SCN4AP35499 1836 aa28.28■■■□□ 2.12
SDCCAG3-201ENST00000298537 FANCGO15287 622 aa28.28■■■□□ 2.12
SDCCAG3-201ENST00000298537 KIF20AO95235 890 aa28.28■■■□□ 2.12
SDCCAG3-201ENST00000298537 CYP2C8P10632 490 aa28.28■■■□□ 2.12
SDCCAG3-201ENST00000298537 TRIM14Q14142 442 aa28.28■■■□□ 2.12
SDCCAG3-201ENST00000298537 FKBP15Q5T1M5 1219 aa28.28■■■□□ 2.12
SDCCAG3-201ENST00000298537 ANO5Q75V66 913 aa28.28■■■□□ 2.12
SDCCAG3-201ENST00000298537 EEPD1Q7L9B9 569 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms