RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 HNRNPCP07910 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 FOXD4Q12950 439 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 FBXO11Q86XK2 927 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 AK8Q96MA6 479 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 PIK3R2O00459 728 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 TJP3O95049 919 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 KRT14P02533 472 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 CASP14P31944 242 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 COPS2P61201 443 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 RWDD4Q6NW29 188 aaKnown RBP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 ELMOD1Q8N336 334 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 HIPK4Q8NE63 616 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 ZNF274Q96GC6 653 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 SENP1Q9P0U3 644 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 PSMA2P25787 234 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 INPP5AQ14642 412 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 KCTD2Q14681 263 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 RBBP7Q16576 425 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 RAB42Q8N4Z0 105 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 GOLGA8TH3BQL2 631 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 GOLGA8HP0CJ92 632 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 LARP4BQ92615 738 aaKnown RBP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 TRAF3IP3Q9Y228 551 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 M0R2C6 588 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 SORBS3O60504 671 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 MAP4P27816 1152 aaKnown RBP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 CCND2P30279 289 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 C2orf54Q08AI8 447 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 AP5M1Q9H0R1 490 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 C14orf93Q9H972 538 aaKnown RBP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 LMBRD1Q9NUN5 540 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 ADA2Q9NZK5 511 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 PKD2L2Q9NZM6 624 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 BRD1O95696 1058 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 KLHL38Q2WGJ6 581 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 PPHLN1Q8NEY8 458 aaKnown RBP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 KIAA0586Q9BVV6 1533 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 A0A1W2PQ27 194 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 A0A1W2PQ64 194 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 A0A1W2PQD8 194 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 FASTKD5Q7L8L6 764 aaKnown RBP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 RASSF3Q86WH2 238 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 ACRBPQ8NEB7 543 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 OSBPL10Q9BXB5 764 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 TM6SF1Q9BZW5 370 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 KMT5AQ9NQR1 393 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 FANCLQ9NW38 375 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 DIS3Q9Y2L1 958 aaKnown RBP9.34□□□□□ -0.91
NIPBL-201ENST00000282516 CHUKO15111 745 aa9.34□□□□□ -0.92
NIPBL-201ENST00000282516 LRRN2O75325 713 aa9.34□□□□□ -0.92
NIPBL-201ENST00000282516 RWDD2BP57060 319 aa9.34□□□□□ -0.92
NIPBL-201ENST00000282516 MAN2A1Q16706 1144 aa9.34□□□□□ -0.92
NIPBL-201ENST00000282516 TADA2BQ86TJ2 420 aa9.34□□□□□ -0.92
NIPBL-201ENST00000282516 TDRD7Q8NHU6 1098 aaKnown RBP9.34□□□□□ -0.92
NIPBL-201ENST00000282516 CDHR1Q96JP9 859 aa9.34□□□□□ -0.92
NIPBL-201ENST00000282516 FAM227BQ96M60 508 aa9.34□□□□□ -0.92
NIPBL-201ENST00000282516 PITPNM3Q9BZ71 974 aa9.34□□□□□ -0.92
NIPBL-201ENST00000282516 TMEM245Q9H330 911 aa9.34□□□□□ -0.92
NIPBL-201ENST00000282516 MAGED2Q9UNF1 606 aaPredicted RBP9.34□□□□□ -0.92
NIPBL-201ENST00000282516 ADGBQ8N7X0 1667 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 TOMM70O94826 608 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 CAPZA2P47755 286 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 RUNX1T1Q06455 604 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 KRT72Q14CN4 511 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 CNGA3Q16281 694 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 HIF1AQ16665 826 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 CCDC142Q17RM4 750 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 NBPF20Q3BBV1 942 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 ZNF713Q8N859 430 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 TMEM206Q9H813 350 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 RRAGDQ9NQL2 400 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 ATG3Q9NT62 314 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 PCDHA1Q9Y5I3 950 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 FRMPD2Q68DX3 1309 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 PARD3Q8TEW0 1356 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 RAPGEF6Q8TEU7 1601 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 C5orf58C9J3I9 102 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 E5RI56 91 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 hCG_1984214I3L0E3 225 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 ALDH1B1P30837 517 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 UBE3AQ05086 875 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 EAPPQ56P03 285 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 TBC1D19Q8N5T2 526 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 CYP26B1Q9NR63 512 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 DIAPH2O60879 1101 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 RAB14P61106 215 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 CNPY4Q8N129 248 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 GINS4Q9BRT9 223 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 OLFML3Q9NRN5 406 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 KIAA1024Q9UPX6 916 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 CCDC195A0A1B0GUA6 201 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 RNMTO43148 476 aaKnown RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 KRT75O95678 551 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 ZSCAN20P17040 1043 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 FAM180AQ6UWF9 173 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 RRM2BQ7LG56 351 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 USP40Q9NVE5 1235 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 ADD3Q9UEY8 706 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms