RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RILPL1Q5EBL4 403 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 RUFY4Q6ZNE9 571 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 TPH2Q8IWU9 490 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 TDHQ8IZJ6 230 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 METTL13Q8N6R0 699 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 RDM1Q8NG50 284 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 ERMNQ8TAM6 284 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 AFAP1L1Q8TED9 768 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 DNAJB3Q8WWF6 145 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 BBXQ8WY36 941 aaPredicted RBP7.34□□□□□ -1.23
CD44-204ENST00000279452 HAS1Q92839 578 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 ZBTB10Q96DT7 871 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 RNPC3Q96LT9 517 aaKnown RBP7.34□□□□□ -1.23
CD44-204ENST00000279452 SCLT1Q96NL6 688 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 PPP1R16BQ96T49 567 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 GDF15Q99988 308 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 LXNQ9BS40 222 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 WNT8AQ9H1J5 351 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 TMEM60Q9H2L4 133 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 NRBP2Q9NSY0 501 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 BMP2KQ9NSY1 1161 aaPredicted RBP7.34□□□□□ -1.23
CD44-204ENST00000279452 VAV3Q9UKW4 847 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 CEP131Q9UPN4 1083 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 GINS2Q9Y248 185 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 PCDHB6Q9Y5E3 794 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 MYH7BA7E2Y1 1941 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 IGKV6D-21A0A0A0MT36 114 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 TMEM150BA6NC51 233 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 RSPH10B2B2RC85 870 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 EML1O00423 815 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 PITPNM1O00562 1244 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 STX6O43752 255 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 IQCF3P0C7M6 154 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 RSPH10BP0C881 870 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 CKBP12277 381 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 ACTN1P12814 892 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 QARSP47897 775 aaKnown RBP7.33□□□□□ -1.24
CD44-204ENST00000279452 PSMC5P62195 406 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 CEBPZQ03701 1054 aaKnown RBP7.33□□□□□ -1.24
CD44-204ENST00000279452 TBC1D8BQ0IIM8 1120 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 ORC2Q13416 577 aaPredicted RBP7.33□□□□□ -1.24
CD44-204ENST00000279452 CTTNQ14247 550 aaKnown RBP7.33□□□□□ -1.24
CD44-204ENST00000279452 EPHA7Q15375 998 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 ZRSR1Q15695 479 aaKnown RBP7.33□□□□□ -1.24
CD44-204ENST00000279452 ZNF484Q5JVG2 852 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 ZNF618Q5T7W0 954 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 PLA2G4FQ68DD2 849 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 TAF2Q6P1X5 1199 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 PSRC1Q6PGN9 363 aaPredicted RBP7.33□□□□□ -1.24
CD44-204ENST00000279452 MTHFD1LQ6UB35 978 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 OTOP2Q7RTS6 562 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 BRAPQ7Z569 592 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 SERINC5Q86VE9 423 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 RPUSD2Q8IZ73 545 aaKnown RBP7.33□□□□□ -1.24
CD44-204ENST00000279452 RASSF8Q8NHQ8 419 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 DHX38Q92620 1227 aaKnown RBP7.33□□□□□ -1.24
CD44-204ENST00000279452 WNT8BQ93098 351 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 DYDC2Q96IM9 177 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 SH2D3AQ9BRG2 576 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 RAB34Q9BZG1 259 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 MTIF3Q9H2K0 278 aaKnown RBP7.33□□□□□ -1.24
CD44-204ENST00000279452 SUGCTQ9HAC7 445 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 IL23AQ9NPF7 189 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 RGL1Q9NZL6 768 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 AKT3Q9Y243 479 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 MAFBQ9Y5Q3 323 aaPredicted RBP7.33□□□□□ -1.24
CD44-204ENST00000279452 COL1A2P08123 1366 aa7.33□□□□□ -1.24
CD44-204ENST00000279452 LTBP2Q14767 1821 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 ZNF862O60290 1169 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 FGBP02675 491 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 P4HBP07237 508 aaKnown RBP7.32□□□□□ -1.24
CD44-204ENST00000279452 ATP4AP20648 1035 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 IBSPP21815 317 aaPredicted RBP7.32□□□□□ -1.24
CD44-204ENST00000279452 KLRC1P26715 233 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 YWHABP31946 246 aaKnown RBP7.32□□□□□ -1.24
CD44-204ENST00000279452 RFC2P35250 354 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 CCT6AP40227 531 aaKnown RBP7.32□□□□□ -1.24
CD44-204ENST00000279452 TOB1P50616 345 aaPredicted RBP7.32□□□□□ -1.24
CD44-204ENST00000279452 CLCN3P51790 818 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 POLGP54098 1239 aaPredicted RBP7.32□□□□□ -1.24
CD44-204ENST00000279452 EPHB4P54760 987 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 PTGDRQ13258 359 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 SHHQ15465 462 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 FOXD4L6Q3SYB3 417 aaPredicted RBP7.32□□□□□ -1.24
CD44-204ENST00000279452 XKR3Q5GH77 459 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 C9orf50Q5SZB4 431 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 HAUS3Q68CZ6 603 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 FOXD4L3Q6VB84 417 aaPredicted RBP7.32□□□□□ -1.24
CD44-204ENST00000279452 DTHD1Q6ZMT9 781 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 ZNF365Q70YC5 407 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 LRRC71Q8N4P6 559 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 NEK9Q8TD19 979 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 SNX29Q8TEQ0 813 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 CEP170P1Q96L14 293 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 MTMR9Q96QG7 549 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 CTAGE1Q96RT6 745 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 MAP7D2Q96T17 732 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 EIF2AK1Q9BQI3 630 aaKnown RBP7.32□□□□□ -1.24
CD44-204ENST00000279452 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.32□□□□□ -1.24
CD44-204ENST00000279452 ZSWIM4Q9H7M6 989 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms