RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 APBB1IPQ7Z5R6 666 aaPredicted RBP16■□□□□ 0.15
PDPK1-201ENST00000268673 ILDR1Q86SU0 546 aaPredicted RBP16■□□□□ 0.15
PDPK1-201ENST00000268673 TRIM9Q9C026 710 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 YIPF3Q9GZM5 350 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 IFT172Q9UG01 1749 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 DIP2CQ9Y2E4 1556 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 DAPK3O43293 454 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 POLE2P56282 527 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 SLFN13Q68D06 897 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 MYCBPAPQ8TBZ2 947 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 THOC1Q96FV9 657 aaKnown RBP16■□□□□ 0.15
PDPK1-201ENST00000268673 CFAP57Q96MR6 1250 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 SH3GL3Q99963 347 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 RAB20Q9NX57 234 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 BCAP29Q9UHQ4 241 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 RABGAP1Q9Y3P9 1069 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 PP2D1A8MPX8 630 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 TRPC3Q13507 836 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 OTUD6AQ7L8S5 288 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 PPM1KQ8N3J5 372 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 PDCD7Q8N8D1 485 aaKnown RBP16■□□□□ 0.15
PDPK1-201ENST00000268673 TTC16Q8NEE8 873 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 ARHGAP42A6NI28 874 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 HDLBPQ00341 1268 aaKnown RBP16■□□□□ 0.15
PDPK1-201ENST00000268673 TMED2Q15363 201 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 SLC18A3Q16572 532 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 MAP7D1Q3KQU3 841 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 GIMAP8Q8ND71 665 aaPredicted RBP16■□□□□ 0.15
PDPK1-201ENST00000268673 GADD45GIP1Q8TAE8 222 aaPredicted RBP16■□□□□ 0.15
PDPK1-201ENST00000268673 SALL1Q9NSC2 1324 aa16■□□□□ 0.15
PDPK1-201ENST00000268673 ALAS1P13196 640 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
PDPK1-201ENST00000268673 FBXO11Q86XK2 927 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 CCDC17Q96LX7 622 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 ERGIC2Q96RQ1 377 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 PIGSQ96S52 555 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 ISCA1Q9BUE6 129 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 ECT2Q9H8V3 914 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 ACSL3O95573 720 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 CD44P16070 742 aaKnown RBP15.99■□□□□ 0.15
PDPK1-201ENST00000268673 ADCY1Q08828 1119 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 FOXR1Q6PIV2 292 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 CALR3Q96L12 384 aaKnown RBP15.99■□□□□ 0.15
PDPK1-201ENST00000268673 POLD4Q9HCU8 107 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 STOML1Q9UBI4 398 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 TBK1Q9UHD2 729 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 ZNF148Q9UQR1 794 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 KCNH2Q12809 1159 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 NT5DC1Q5TFE4 455 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 TEX2Q8IWB9 1127 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 XPO6Q96QU8 1125 aaKnown RBP15.99■□□□□ 0.15
PDPK1-201ENST00000268673 AMACRQ9UHK6 382 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 CYB5D1Q6P9G0 228 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 ARL8AQ96BM9 186 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 Q9H521 79 aa15.99■□□□□ 0.15
PDPK1-201ENST00000268673 MAP3K7O43318 606 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 FCER1AP12319 257 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 CYP4F22Q6NT55 531 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 ZNF653Q96CK0 615 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 ISCUQ9H1K1 167 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 VCPKMTQ9H867 229 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 PCDHA1Q9Y5I3 950 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 OVOS2A0A0G2JMS6 1433 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 CHRNA3P32297 505 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 CCDC14Q49A88 953 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 SUSD4Q5VX71 490 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 CAPN12Q6ZSI9 719 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 CD248Q9HCU0 757 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 PLAGL2Q9UPG8 496 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 CSADQ9Y600 493 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 FOSP01100 380 aaPredicted RBP15.98■□□□□ 0.15
PDPK1-201ENST00000268673 TRIM28Q13263 835 aaKnown RBP15.98■□□□□ 0.15
PDPK1-201ENST00000268673 DHX34Q14147 1143 aaKnown RBP15.98■□□□□ 0.15
PDPK1-201ENST00000268673 CRYMQ14894 314 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 ZNF449Q6P9G9 518 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 RAD54LQ92698 747 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 ZNF512BQ96KM6 892 aaPredicted RBP15.98■□□□□ 0.15
PDPK1-201ENST00000268673 SENP2Q9HC62 589 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 NOD1Q9Y239 953 aa15.98■□□□□ 0.15
PDPK1-201ENST00000268673 MRPL11Q9Y3B7 192 aaKnown RBP15.98■□□□□ 0.15
PDPK1-201ENST00000268673 PHF20L1A8MW92 1017 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 AGTP01019 485 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 MKRN3Q13064 507 aaKnown RBP15.97■□□□□ 0.15
PDPK1-201ENST00000268673 LRRC23Q53EV4 343 aaPredicted RBP15.97■□□□□ 0.15
PDPK1-201ENST00000268673 HSP90AA5PQ58FG0 334 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 GPATCH4Q5T3I0 446 aaKnown RBP15.97■□□□□ 0.15
PDPK1-201ENST00000268673 DCAF15Q66K64 600 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 TMC4Q7Z404 712 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 FOXP4Q8IVH2 680 aaPredicted RBP15.97■□□□□ 0.15
PDPK1-201ENST00000268673 PPEF1O14829 653 aaPredicted RBP15.97■□□□□ 0.15
PDPK1-201ENST00000268673 LRRN2O75325 713 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 SARSP49591 514 aaKnown RBP15.97■□□□□ 0.15
PDPK1-201ENST00000268673 CTAGE3PQ8IX95 158 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 GRAMD1AQ96CP6 724 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 ETNK1Q9HBU6 452 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 SMARCAL1Q9NZC9 954 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
PDPK1-201ENST00000268673 EXOC1LA0A1B0GW35 172 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 CCT8L1PA6NM43 557 aa15.97■□□□□ 0.15
PDPK1-201ENST00000268673 MFAP3P55082 362 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms