RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZBTB6Q15916 424 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 L1TD1Q5T7N2 865 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 ZC3H15Q8WU90 426 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 LPIN3Q9BQK8 851 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 CRNKL1Q9BZJ0 848 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 A0A1B0GTH6 734 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 GOLGA8AA7E2F4 631 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 NCLP19338 710 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 ACO1P21399 889 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 ICAM3P32942 547 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 TMEM173Q86WV6 379 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 KLHDC9Q8NEP7 349 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 BCL7CQ8WUZ0 217 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 ARID3AQ99856 593 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 RTP3Q9BQQ7 232 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 REEP2Q9BRK0 252 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 B4GALT5O43286 388 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 CHRNB2P17787 502 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 TYRO3Q06418 890 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 MCM6Q14566 821 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 PHLDB3Q6NSJ2 640 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 TMEM161BQ8NDZ6 487 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 KRT23Q9C075 422 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 SPTLC3Q9NUV7 552 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 COL6A1P12109 1028 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 TECP42680 631 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 SOX4Q06945 474 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 BECN1Q14457 450 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 FAM219BQ5XKK7 198 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 SARM1Q6SZW1 724 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 USP50Q70EL3 339 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 TRIM7Q9C029 511 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 CENPEQ02224 2701 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 USH1GQ495M9 461 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 CYP4F22Q6NT55 531 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 GJB7Q6PEY0 223 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 ASAP3Q8TDY4 903 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 AGTPBP1Q9UPW5 1226 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 ANKRD11Q6UB99 2663 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 MYO10Q9HD67 2058 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 PDE2AO00408 941 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 CST3P01034 146 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 SLFN14P0C7P3 912 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 AMPD2Q01433 879 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 TRADDQ15628 312 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 HSP90AA4PQ58FG1 418 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 PIGOQ8TEQ8 1089 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 KREMEN1Q96MU8 473 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 ANO3Q9BYT9 981 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 ARHGAP20Q9P2F6 1191 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 HMGXB4Q9UGU5 601 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 PCDHA1Q9Y5I3 950 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 C1QAP02745 245 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 MAML3Q96JK9 1138 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 C7orf25Q9BPX7 421 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 SPATC1LQ9H0A9 340 aa6.43□□□□□ -1.38
TOPBP1-201ENST00000260810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 TSPY2A6NKD2 308 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 SPTLC1O15269 473 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 BMP3P12645 472 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 CYBAP13498 195 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 KMT5BQ4FZB7 885 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 PCNX4Q63HM2 1172 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 POP1Q99575 1024 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 RNF39Q9H2S5 420 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 AGO3Q9H9G7 860 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 FER1L5A0AVI2 2057 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 SPTLC2O15270 562 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 HSP90AA1P07900 732 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 ZNF618Q5T7W0 954 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 RSPO2Q6UXX9 243 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 KIAA1524Q8TCG1 905 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 BPIFA3Q9BQP9 254 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 NXF1Q9UBU9 619 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 CEP131Q9UPN4 1083 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 GOLGA6L22H0YM25 854 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 HMGB1P09429 215 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 TNFSF9P41273 254 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 FAM160A1Q05DH4 1040 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 WDR44Q5JSH3 913 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 DAB2IPQ5VWQ8 1189 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 PAQR9Q6ZVX9 377 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 RIOX2Q8IUF8 465 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 EFCAB13Q8IY85 973 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 TTC12Q9H892 705 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 CNNM2Q9H8M5 875 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 TAS2R14Q9NYV8 317 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 SWAP70Q9UH65 585 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 COG5Q9UP83 839 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 CMYA5Q8N3K9 4069 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 VWA3AA6NCI4 1184 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 ITGB1P05556 798 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 HOXC13P31276 330 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 ARL2P36404 184 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 ALDH5A1P51649 535 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 ATP2B2Q01814 1243 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 GSE1Q14687 1217 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 IFNL1Q8IU54 200 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 SLC35C1Q96A29 364 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms