RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 HERVK_113P62684 666 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 MAP2K1Q02750 393 aaPredicted RBP9.99□□□□□ -0.81
CKAP2-201ENST00000258607 TBX2Q13207 712 aaPredicted RBP9.99□□□□□ -0.81
CKAP2-201ENST00000258607 Q3C1V9 767 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 FAM114A1Q8IWE2 563 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 KAT5Q92993 513 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 CBWD1Q9BRT8 395 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 CCDC94Q9BW85 323 aaPredicted RBP9.99□□□□□ -0.81
CKAP2-201ENST00000258607 AP1M1Q9BXS5 423 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 LRRIQ4A6NIV6 560 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 N4BP1O75113 896 aaKnown RBP9.98□□□□□ -0.81
CKAP2-201ENST00000258607 GJB1P08034 283 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 SNHG28P0DPA3 235 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 DLG4P78352 724 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 GIT2Q14161 759 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 SPDYE2Q495Y8 402 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 MIIPQ5JXC2 388 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 HS2ST1Q7LGA3 356 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 CERS3Q8IU89 383 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 DHTKD1Q96HY7 919 aaPredicted RBP9.98□□□□□ -0.81
CKAP2-201ENST00000258607 CEP170P1Q96L14 293 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 NT5C3AQ9H0P0 336 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 LIMA1Q9UHB6 759 aaKnown RBP9.98□□□□□ -0.81
CKAP2-201ENST00000258607 MRPL11Q9Y3B7 192 aaKnown RBP9.98□□□□□ -0.81
CKAP2-201ENST00000258607 ZNF263O14978 683 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 KRT86O43790 486 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 NR3C1P04150 777 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 PRELPP51888 382 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 MTM1Q13496 603 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 HLTFQ14527 1009 aaKnown RBP eCLIP9.98□□□□□ -0.81
CKAP2-201ENST00000258607 DAB2IPQ5VWQ8 1189 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 RINT1Q6NUQ1 792 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 PADI6Q6TGC4 694 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 PAXIP1Q6ZW49 1069 aaPredicted RBP9.98□□□□□ -0.81
CKAP2-201ENST00000258607 ZBTB33Q86T24 672 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 DAGLBQ8NCG7 672 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 PNKPQ96T60 521 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 C7orf25Q9BPX7 421 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 HAUS4Q9H6D7 363 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 ARGLU1Q9NWB6 273 aaPredicted RBP9.98□□□□□ -0.81
CKAP2-201ENST00000258607 GABBR1Q9UBS5 961 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 TMX2Q9Y320 296 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 BRWD3Q6RI45 1802 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 A0A087X0T9 212 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 CCP110O43303 1012 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 SLITRK3O94933 977 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 FAM228BP0C875 321 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 KRT5P13647 590 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 ZNF211Q13398 564 aaPredicted RBP9.98□□□□□ -0.81
CKAP2-201ENST00000258607 MAN2A1Q16706 1144 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 EXOC3L4Q17RC7 722 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 GLYCTKQ8IVS8 523 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 METTL13Q8N6R0 699 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 HDAC7Q8WUI4 952 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 SECISBP2LQ93073 1101 aaKnown RBP9.98□□□□□ -0.81
CKAP2-201ENST00000258607 SCLT1Q96NL6 688 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 FAM118BQ9BPY3 351 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 PYM1Q9BRP8 204 aaKnown RBP9.98□□□□□ -0.81
CKAP2-201ENST00000258607 TEKT3Q9BXF9 490 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 FAM107BQ9H098 131 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 SALL4Q9UJQ4 1053 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 MYO6Q9UM54 1294 aa9.98□□□□□ -0.81
CKAP2-201ENST00000258607 LRP5O75197 1615 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 LAD1O00515 517 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 VIL1P09327 827 aaKnown RBP9.97□□□□□ -0.81
CKAP2-201ENST00000258607 SRGAP2CP0DJJ0 459 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 BIRC3Q13489 604 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 GPR162Q16538 588 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 CT47A1Q5JQC4 288 aaPredicted RBP9.97□□□□□ -0.81
CKAP2-201ENST00000258607 TMEM63BQ5T3F8 832 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 SFMBT2Q5VUG0 894 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 TATDN1Q6P1N9 297 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 PASD1Q8IV76 773 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 FAM186BQ8IYM0 893 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 PRPF38AQ8NAV1 312 aaKnown RBP9.97□□□□□ -0.81
CKAP2-201ENST00000258607 TRAPPC12Q8WVT3 735 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 FHDC1Q9C0D6 1143 aaPredicted RBP9.97□□□□□ -0.81
CKAP2-201ENST00000258607 ZNF446Q9NWS9 450 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 CGNQ9P2M7 1197 aaKnown RBP9.97□□□□□ -0.81
CKAP2-201ENST00000258607 ROBO3Q96MS0 1386 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 RASSF10A6NK89 507 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 ZSCAN20P17040 1043 aaPredicted RBP9.97□□□□□ -0.81
CKAP2-201ENST00000258607 EEF1GP26641 437 aaKnown RBP9.97□□□□□ -0.81
CKAP2-201ENST00000258607 PRPHP41219 470 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 ACOT2P49753 483 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 TNIP1Q15025 636 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 NLRX1Q86UT6 975 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 SLFN12Q8IYM2 578 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 GLG1Q92896 1179 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 STK17AQ9UEE5 414 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 AJAP1Q9UKB5 411 aaPredicted RBP9.97□□□□□ -0.81
CKAP2-201ENST00000258607 UNC80Q8N2C7 3258 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 ZBED4O75132 1171 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 ENTPD3O75355 529 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 EPB41P11171 864 aaKnown RBP9.97□□□□□ -0.81
CKAP2-201ENST00000258607 VPS41P49754 854 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 FXR2P51116 673 aaKnown RBP eCLIP9.97□□□□□ -0.81
CKAP2-201ENST00000258607 VSNL1P62760 191 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 LLGL2Q6P1M3 1020 aa9.97□□□□□ -0.81
CKAP2-201ENST00000258607 GOLGA1Q92805 767 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms