RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 LRRC15Q8TF66 581 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 TMEM39BQ9GZU3 492 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 LARSQ9P2J5 1176 aaKnown RBP16.05■□□□□ 0.16
CAB39-201ENST00000258418 PRR12Q9ULL5 1215 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 GINS2Q9Y248 185 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 ATP8B1O43520 1251 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 CASP5P51878 434 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 CPLX4Q7Z7G2 160 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 GPATCH11Q8N954 259 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 RUSC1Q9BVN2 902 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 SH2D4AQ9H788 454 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 CEP72Q9P209 647 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 TNNI1P19237 187 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 PSMC2P35998 433 aaKnown RBP16.05■□□□□ 0.16
CAB39-201ENST00000258418 PSMD2Q13200 908 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 LMBRD2Q68DH5 695 aaPredicted RBP16.05■□□□□ 0.16
CAB39-201ENST00000258418 NIM1KQ8IY84 436 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 DNAJC7Q99615 494 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 NUCKS1Q9H1E3 243 aaKnown RBP16.05■□□□□ 0.16
CAB39-201ENST00000258418 RIOX1Q9H6W3 641 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 PLAGL2Q9UPG8 496 aa16.05■□□□□ 0.16
CAB39-201ENST00000258418 MRPL11Q9Y3B7 192 aaKnown RBP16.05■□□□□ 0.16
CAB39-201ENST00000258418 RRP15Q9Y3B9 282 aaKnown RBP16.05■□□□□ 0.16
CAB39-201ENST00000258418 MNAT1P51948 309 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 PLTPP55058 493 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 PTK2Q05397 1052 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 PPFIA1Q13136 1202 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 TRIP13Q15645 432 aaPredicted RBP16.04■□□□□ 0.16
CAB39-201ENST00000258418 GRIPAP1Q4V328 841 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 CENPPQ6IPU0 288 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 CCDC26Q8TAB7 109 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 EXOC4Q96A65 974 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 SAAL1Q96ER3 474 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 KCNK9Q9NPC2 374 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 MED4Q9NPJ6 270 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 L1RE1Q9UN81 338 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 UTP11Q9Y3A2 253 aaKnown RBP16.04■□□□□ 0.16
CAB39-201ENST00000258418 CTNNA2P26232 953 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 PDIA5Q14554 519 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 FOXR1Q6PIV2 292 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 GSTA5Q7RTV2 222 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 FNBP1Q96RU3 617 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 TMOD4Q9NZQ9 345 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 FAM184BQ9ULE4 1060 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 FGGP02679 453 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 DAGLBQ8NCG7 672 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 CNKSR1Q969H4 720 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 AMACRQ9UHK6 382 aa16.04■□□□□ 0.16
CAB39-201ENST00000258418 GOLGB1Q14789 3259 aaKnown RBP16.03■□□□□ 0.16
CAB39-201ENST00000258418 TMEM150BA6NC51 233 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 MAP2K1Q02750 393 aaPredicted RBP16.03■□□□□ 0.16
CAB39-201ENST00000258418 NNTQ13423 1086 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 COG2Q14746 738 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 DRAP1Q14919 205 aaPredicted RBP16.03■□□□□ 0.16
CAB39-201ENST00000258418 ARHGEF16Q5VV41 709 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 PAXIP1Q6ZW49 1069 aaPredicted RBP16.03■□□□□ 0.16
CAB39-201ENST00000258418 TRAPPC11Q7Z392 1133 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 SCFD1Q8WVM8 642 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 CRAMP1Q96RY5 1269 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 ASIC3Q9UHC3 531 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
CAB39-201ENST00000258418 MYO1CO00159 1063 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 SLC16A4O15374 487 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 PPP1R11O60927 126 aaPredicted RBP16.03■□□□□ 0.16
CAB39-201ENST00000258418 ZRANB2O95218 330 aaKnown RBP eCLIP16.03■□□□□ 0.164e-6■■□□□ 12.8
CAB39-201ENST00000258418 MYBL2P10244 700 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 ADRA2BP18089 450 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 IFNAR2P48551 515 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 hCG_1984214I3L0E3 225 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 UCHL3P15374 230 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 PBX1P40424 430 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 ZNF713Q8N859 430 aaPredicted RBP16.03■□□□□ 0.16
CAB39-201ENST00000258418 GOLGA5Q8TBA6 731 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 ERGIC2Q96RQ1 377 aa16.03■□□□□ 0.16
CAB39-201ENST00000258418 METTL14Q9HCE5 456 aaKnown RBP16.03■□□□□ 0.16
CAB39-201ENST00000258418 LRRC10BA6NIK2 292 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 PSMD14O00487 310 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 MYZAPP0CAP1 466 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.16
CAB39-201ENST00000258418 EN1Q05925 392 aaPredicted RBP16.02■□□□□ 0.16
CAB39-201ENST00000258418 APOBEC3HQ6NTF7 200 aaKnown RBP16.02■□□□□ 0.16
CAB39-201ENST00000258418 POMGNT1Q8WZA1 660 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 HAS1Q92839 578 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 AGBL1Q96MI9 1066 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 LXNQ9BS40 222 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 EHD4Q9H223 541 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 MSH4O15457 936 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 KIFC3Q9BVG8 833 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 ANKFY1Q9P2R3 1169 aa16.02■□□□□ 0.16
CAB39-201ENST00000258418 FAM86B1E9PN63 330 aa16.02■□□□□ 0.15
CAB39-201ENST00000258418 IPO5O00410 1097 aaKnown RBP16.02■□□□□ 0.15
CAB39-201ENST00000258418 FAM86B2P0C5J1 330 aa16.02■□□□□ 0.15
CAB39-201ENST00000258418 NF2P35240 595 aa16.02■□□□□ 0.15
CAB39-201ENST00000258418 EPHB4P54760 987 aa16.02■□□□□ 0.15
CAB39-201ENST00000258418 TRAF1Q13077 416 aa16.02■□□□□ 0.15
CAB39-201ENST00000258418 NLRX1Q86UT6 975 aa16.02■□□□□ 0.15
CAB39-201ENST00000258418 ATMINO43313 823 aaPredicted RBP16.01■□□□□ 0.15
CAB39-201ENST00000258418 VIMP08670 466 aaKnown RBP16.01■□□□□ 0.15
CAB39-201ENST00000258418 FGRP09769 529 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms