RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 SYN2Q92777 582 aaPredicted RBP28.04■■■□□ 2.08
RAB40C-201ENST00000248139 ARL8AQ96BM9 186 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 GOLGA6AQ9NYA3 693 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 AIPL1Q9NZN9 384 aa28.04■■■□□ 2.08
RAB40C-201ENST00000248139 PON1P27169 355 aa28.03■■■□□ 2.08
RAB40C-201ENST00000248139 GUCY2FP51841 1108 aa28.03■■■□□ 2.08
RAB40C-201ENST00000248139 SLC27A3Q5K4L6 730 aa28.03■■■□□ 2.08
RAB40C-201ENST00000248139 FOXR2Q6PJQ5 311 aa28.03■■■□□ 2.08
RAB40C-201ENST00000248139 NOP2P46087 812 aaKnown RBP28.03■■■□□ 2.08
RAB40C-201ENST00000248139 ZC2HC1CQ53FD0 456 aaPredicted RBP28.03■■■□□ 2.08
RAB40C-201ENST00000248139 SYDE2Q5VT97 1194 aa28.03■■■□□ 2.08
RAB40C-201ENST00000248139 KLHL7Q8IXQ5 586 aa28.03■■■□□ 2.08
RAB40C-201ENST00000248139 NUCKS1Q9H1E3 243 aaKnown RBP28.03■■■□□ 2.08
RAB40C-201ENST00000248139 CWC15Q9P013 229 aaKnown RBP28.03■■■□□ 2.08
RAB40C-201ENST00000248139 HEXIM1O94992 359 aaKnown RBP28.02■■■□□ 2.08
RAB40C-201ENST00000248139 ECE1P42892 770 aa28.02■■■□□ 2.08
RAB40C-201ENST00000248139 ITIH3Q06033 890 aa28.02■■■□□ 2.08
RAB40C-201ENST00000248139 EXOC3L4Q17RC7 722 aa28.02■■■□□ 2.08
RAB40C-201ENST00000248139 NAP1L4Q99733 375 aaKnown RBP28.02■■■□□ 2.08
RAB40C-201ENST00000248139 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.02■■■□□ 2.08
RAB40C-201ENST00000248139 GREB1LQ9C091 1923 aaPredicted RBP28.02■■■□□ 2.08
RAB40C-201ENST00000248139 SIPA1L1O43166 1804 aa28.02■■■□□ 2.08
RAB40C-201ENST00000248139 ONECUT3O60422 494 aaPredicted RBP28.02■■■□□ 2.08
RAB40C-201ENST00000248139 PPARDQ03181 441 aa28.02■■■□□ 2.08
RAB40C-201ENST00000248139 EDRF1Q3B7T1 1238 aa28.02■■■□□ 2.08
RAB40C-201ENST00000248139 MEI1Q5TIA1 1274 aa28.02■■■□□ 2.08
RAB40C-201ENST00000248139 EIF2AK1Q9BQI3 630 aaKnown RBP28.02■■■□□ 2.08
RAB40C-201ENST00000248139 PITPNM2Q9BZ72 1349 aa28.01■■■□□ 2.08
RAB40C-201ENST00000248139 AFPP02771 609 aaKnown RBP28.01■■■□□ 2.07
RAB40C-201ENST00000248139 NMT1P30419 496 aaKnown RBP28.01■■■□□ 2.07
RAB40C-201ENST00000248139 AP3B2Q13367 1082 aa28.01■■■□□ 2.07
RAB40C-201ENST00000248139 TMX4Q9H1E5 349 aaPredicted RBP28.01■■■□□ 2.07
RAB40C-201ENST00000248139 RRP15Q9Y3B9 282 aaKnown RBP28.01■■■□□ 2.07
RAB40C-201ENST00000248139 ASTN1O14525 1302 aa28.01■■■□□ 2.07
RAB40C-201ENST00000248139 MYO1CO00159 1063 aa28.01■■■□□ 2.07
RAB40C-201ENST00000248139 XRCC5P13010 732 aaKnown RBP28.01■■■□□ 2.07
RAB40C-201ENST00000248139 KCTD16Q68DU8 428 aa28.01■■■□□ 2.07
RAB40C-201ENST00000248139 ZC3H3Q8IXZ2 948 aaKnown RBP28.01■■■□□ 2.07
RAB40C-201ENST00000248139 ERMNQ8TAM6 284 aa28.01■■■□□ 2.07
RAB40C-201ENST00000248139 VAV3Q9UKW4 847 aa28.01■■■□□ 2.07
RAB40C-201ENST00000248139 KCNK3O14649 394 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 ECE2O60344 883 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 NR3C1P04150 777 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 ALDH1B1P30837 517 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 COG2Q14746 738 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 KIAA1755Q5JYT7 1200 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 DACT2Q5SW24 774 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 EPM2AIP1Q7L775 607 aaPredicted RBP28■■■□□ 2.07
RAB40C-201ENST00000248139 TPH2Q8IWU9 490 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 FAM76AQ8TAV0 307 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 CFBP00751 764 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 KRT14P02533 472 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 SREBF1P36956 1147 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 TATDN1Q6P1N9 297 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 SH2D3CQ8N5H7 860 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 GLT8D2Q9H1C3 349 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 FEZ2Q9UHY8 353 aaPredicted RBP28■■■□□ 2.07
RAB40C-201ENST00000248139 TRAF3IP3Q9Y228 551 aa28■■■□□ 2.07
RAB40C-201ENST00000248139 BMP3P12645 472 aa27.99■■■□□ 2.07
RAB40C-201ENST00000248139 EPHB4P54760 987 aa27.99■■■□□ 2.07
RAB40C-201ENST00000248139 Q4G0T1 1027 aa27.99■■■□□ 2.07
RAB40C-201ENST00000248139 TMEM179Q6ZVK1 233 aa27.99■■■□□ 2.07
RAB40C-201ENST00000248139 SRLQ86TD4 932 aa27.99■■■□□ 2.07
RAB40C-201ENST00000248139 BCS1LQ9Y276 419 aa27.99■■■□□ 2.07
RAB40C-201ENST00000248139 PCDHGC5Q9Y5F6 944 aa27.99■■■□□ 2.07
RAB40C-201ENST00000248139 PODNQ7Z5L7 613 aa27.99■■■□□ 2.07
RAB40C-201ENST00000248139 QTRT2Q9H974 415 aaKnown RBP27.99■■■□□ 2.07
RAB40C-201ENST00000248139 SPATA31A6Q5VVP1 1343 aa27.99■■■□□ 2.07
RAB40C-201ENST00000248139 SCN9AQ15858 1988 aa27.99■■■□□ 2.07
RAB40C-201ENST00000248139 LUC7LQ9NQ29 371 aaKnown RBP27.98■■■□□ 2.07
RAB40C-201ENST00000248139 RABGAP1Q9Y3P9 1069 aa27.98■■■□□ 2.07
RAB40C-201ENST00000248139 TTMPQ5BVD1 217 aa27.98■■■□□ 2.07
RAB40C-201ENST00000248139 CCDC174Q6PII3 467 aa27.98■■■□□ 2.07
RAB40C-201ENST00000248139 INPP4AQ96PE3 977 aaPredicted RBP27.98■■■□□ 2.07
RAB40C-201ENST00000248139 ZIM3Q96PE6 472 aa27.98■■■□□ 2.07
RAB40C-201ENST00000248139 TRPC5Q9UL62 973 aaPredicted RBP27.98■■■□□ 2.07
RAB40C-201ENST00000248139 PRR12Q9ULL5 1215 aa27.98■■■□□ 2.07
RAB40C-201ENST00000248139 ZYXQ15942 572 aaKnown RBP27.97■■■□□ 2.07
RAB40C-201ENST00000248139 PPP4R3CPQ6ZMV5 832 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 FRMD5Q7Z6J6 570 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 CASKIN2Q8WXE0 1202 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 PRMT6Q96LA8 375 aaPredicted RBP27.97■■■□□ 2.07
RAB40C-201ENST00000248139 WDR18Q9BV38 432 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 GCNT4Q9P109 453 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 NAGPAQ9UK23 515 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 TBCAO75347 108 aaKnown RBP27.97■■■□□ 2.07
RAB40C-201ENST00000248139 EPHA7Q15375 998 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 AOC3Q16853 763 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 ALKBH5Q6P6C2 394 aaKnown RBP27.97■■■□□ 2.07
RAB40C-201ENST00000248139 ACER1Q8TDN7 264 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 SLC35C1Q96A29 364 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 MASTLQ96GX5 879 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 DYDC2Q96IM9 177 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 CCDC43Q96MW1 224 aaKnown RBP27.97■■■□□ 2.07
RAB40C-201ENST00000248139 AP1M1Q9BXS5 423 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 QSER1Q2KHR3 1735 aa27.97■■■□□ 2.07
RAB40C-201ENST00000248139 TMCO5BA8MYB1 307 aa27.96■■■□□ 2.07
RAB40C-201ENST00000248139 RINT1Q6NUQ1 792 aa27.96■■■□□ 2.07
RAB40C-201ENST00000248139 IDI2Q9BXS1 227 aa27.96■■■□□ 2.07
RAB40C-201ENST00000248139 SIX2Q9NPC8 291 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms