RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 MAGEC2Q9UBF1 373 aaPredicted RBP20.77■□□□□ 0.91
TNFSF9-201ENST00000245817 GABBR1Q9UBS5 961 aa20.77■□□□□ 0.91
TNFSF9-201ENST00000245817 TRIM49BA6NDI0 452 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 BACH1O14867 736 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 SORBS3O60504 671 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 SP2Q02086 613 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 SREBF2Q12772 1141 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 FILIP1LQ4L180 1135 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 SWSAP1Q6NVH7 229 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 PADI6Q6TGC4 694 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 GPR142Q7Z601 462 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 PLEKHH3Q7Z736 793 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 DPP9Q86TI2 863 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 CREBRFQ8IUR6 639 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 CSGALNACT2Q8N6G5 542 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 ANKEF1Q9NU02 776 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 ODF2LQ9ULJ1 636 aa20.76■□□□□ 0.91
TNFSF9-201ENST00000245817 IGF2BP3O00425 579 aaKnown RBP eCLIP20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 AOC2O75106 756 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 FGFR1OPO95684 399 aaKnown RBP20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 UBA1P22314 1058 aaKnown RBP20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 MAP2K2P36507 400 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 LRRC41Q15345 812 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 CDKAL1Q5VV42 579 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 REM2Q8IYK8 340 aaPredicted RBP20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 MYCT1Q8N699 235 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 MORC4Q8TE76 937 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 FGD4Q96M96 766 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 SRRTQ9BXP5 876 aaKnown RBP20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 THAP9Q9H5L6 903 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 MLXIPQ9HAP2 919 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 PARVGQ9HBI0 331 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 SLC5A4Q9NY91 659 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 CPA4Q9UI42 421 aa20.75■□□□□ 0.91
TNFSF9-201ENST00000245817 SUPT20HL2P0C7V6 817 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 GUCY2CP25092 1073 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 RARRES1P49788 294 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 PMS1P54277 932 aaKnown RBP20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 UGCGQ16739 394 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 ZNF792Q3KQV3 632 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 ANKRD40Q6AI12 368 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 CENPPQ6IPU0 288 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 TTI2Q6NXR4 508 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 ABHD15Q6UXT9 468 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 TRMT1LQ7Z2T5 733 aaKnown RBP20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 SFR1Q86XK3 245 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 IFNL1Q8IU54 200 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 FAM114A1Q8IWE2 563 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 ZIC5Q96T25 663 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 BCAS3Q9H6U6 928 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 MRPL44Q9H9J2 332 aaKnown RBP20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 SEL1LQ9UBV2 794 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 LCTP09848 1927 aa20.74■□□□□ 0.91
TNFSF9-201ENST00000245817 TM4SF4P48230 202 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 LRRC63Q05C16 580 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 XKR9Q5GH70 373 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 PCDHA2Q9Y5H9 948 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 PCNTO95613 3336 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 RSPH10B2B2RC85 870 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 KCNJ18B7U540 433 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 GGPS1O95749 300 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 RSPH10BP0C881 870 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 KCNJ12Q14500 433 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 LY6KQ17RY6 165 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 UTP14CQ5TAP6 766 aaKnown RBP20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 METTL7BQ6UX53 244 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 ARMCX2Q7L311 632 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 TIPINQ9BVW5 301 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 ZFYVE28Q9HCC9 887 aa20.73■□□□□ 0.91
TNFSF9-201ENST00000245817 FARP2O94887 1054 aaPredicted RBP20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 TPM2P07951 284 aa20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 TTLL4Q14679 1199 aa20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 TCP11X2Q5H9J9 407 aa20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 STXBP4Q6ZWJ1 553 aa20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 ZNF467Q7Z7K2 595 aaPredicted RBP20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 FBXO16Q8IX29 292 aaPredicted RBP20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 NAP1L5Q96NT1 182 aaPredicted RBP20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 SEMA6BQ9H3T3 888 aa20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 ZNF302Q9NR11 478 aa20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 OLFML3Q9NRN5 406 aa20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 DDX41Q9UJV9 622 aaKnown RBP20.72■□□□□ 0.91
TNFSF9-201ENST00000245817 SLC15A5A6NIM6 579 aa20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 SFI1A8K8P3 1242 aa20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 USO1O60763 962 aaKnown RBP20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 HIP1RO75146 1068 aa20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 ATG7O95352 703 aa20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 EEF1GP26641 437 aaKnown RBP20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 GRB14Q14449 540 aa20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 FAM160B1Q5W0V3 765 aa20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 CCDC60Q8IWA6 550 aaPredicted RBP20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 DUSP9Q99956 384 aaKnown RBP20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 IMPACTQ9P2X3 320 aa20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 DIS3Q9Y2L1 958 aaKnown RBP20.71■□□□□ 0.91
TNFSF9-201ENST00000245817 NOP56O00567 594 aaKnown RBP20.7■□□□□ 0.91
TNFSF9-201ENST00000245817 GCNT3O95395 438 aa20.7■□□□□ 0.91
TNFSF9-201ENST00000245817 ODR4Q5SWX8 454 aa20.7■□□□□ 0.91
TNFSF9-201ENST00000245817 FOXR2Q6PJQ5 311 aa20.7■□□□□ 0.91
TNFSF9-201ENST00000245817 CCDC186Q7Z3E2 898 aa20.7■□□□□ 0.91
TNFSF9-201ENST00000245817 TMC6Q7Z403 805 aa20.7■□□□□ 0.91
TNFSF9-201ENST00000245817 FILIP1Q7Z7B0 1213 aa20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms