RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 KRT40Q6A162 431 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 PGBD3Q8N328 593 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 ARRDC4Q8NCT1 418 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 SPATA31E1Q6ZUB1 1445 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 ANXA1P04083 346 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 RARBP10826 455 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 TFAMQ00059 246 aaKnown RBP7.97□□□□□ -1.13
MED28-201ENST00000237380 NSUN6Q8TEA1 469 aaKnown RBP7.97□□□□□ -1.13
MED28-201ENST00000237380 EML4Q9HC35 981 aaKnown RBP7.97□□□□□ -1.13
MED28-201ENST00000237380 SEL1LQ9UBV2 794 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 LAMC1P11047 1609 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 SNTNA6NMZ2 147 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 GOLGA8RI6L899 631 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 HPDP32754 393 aaPredicted RBP7.97□□□□□ -1.13
MED28-201ENST00000237380 ANO4Q32M45 955 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 DNAJC10Q8IXB1 793 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 USP17L10C9JJH3 530 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 NHEJ1Q9H9Q4 299 aaPredicted RBP7.97□□□□□ -1.13
MED28-201ENST00000237380 TIMM10P62072 90 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 RRAGAQ7L523 313 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 RRM2BQ7LG56 351 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 PBKQ96KB5 322 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 TXLNGQ9NUQ3 528 aa7.97□□□□□ -1.13
MED28-201ENST00000237380 FRMPD2Q68DX3 1309 aaPredicted RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 PNMA6FA0A0J9YX94 578 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 COBLO75128 1261 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 EEF1GP26641 437 aaKnown RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 SKP1P63208 163 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 TTC31Q49AM3 519 aaPredicted RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 FAM26FQ5R3K3 315 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 NOSTRINQ8IVI9 506 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 ASAP3Q8TDY4 903 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 SAR1BQ9Y6B6 198 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 CLDN3O15551 220 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 GUCA1AP43080 201 aaPredicted RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 ZNF667Q5HYK9 610 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 TTC19Q6DKK2 380 aaPredicted RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 LARP4BQ92615 738 aaKnown RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 MRPL4Q9BYD3 311 aaKnown RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 SUDS3Q9H7L9 328 aaPredicted RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 MPP6Q9NZW5 540 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 CHMP2BQ9UQN3 213 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 PFASO15067 1338 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 A0A1B0GW55 424 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 VAMP4O75379 141 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 DUX4L2P0CJ85 424 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 DUX4L3P0CJ86 424 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 DUX4L4P0CJ87 422 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 DUX4L5P0CJ88 424 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 DUX4L6P0CJ89 424 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 DUX4L7P0CJ90 424 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 MSH2P43246 934 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 RAD51AP2Q09MP3 1159 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 CAPRIN1Q14444 709 aaKnown RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 CCDC184Q52MB2 194 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 BEND3Q5T5X7 828 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 SMAP1Q8IYB5 467 aaPredicted RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 FNBP4Q8N3X1 1017 aaPredicted RBP7.96□□□□□ -1.13
MED28-201ENST00000237380 KCTD17Q8N5Z5 321 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 PBXIP1Q96AQ6 731 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 TBC1D7Q9P0N9 293 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 DUX4Q9UBX2 424 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 PCDHB7Q9Y5E2 793 aa7.96□□□□□ -1.13
MED28-201ENST00000237380 TNPO2O14787 897 aaKnown RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 RPS12P25398 132 aaKnown RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 CAV1Q03135 178 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 TBC1D9BQ66K14 1250 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 MYLK4Q86YV6 388 aaPredicted RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 FANCBQ8NB91 859 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 U2AF1L4Q8WU68 220 aaKnown RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 CDK5RAP1Q96SZ6 601 aaKnown RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 RNF181Q9P0P0 153 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 VPS18Q9P253 973 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 FAF1Q9UNN5 650 aaPredicted RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 TMED2Q15363 201 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 WHAMMP3Q1A5X7 153 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 DEPDC1BQ8WUY9 529 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 AFG1LQ8WV93 481 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 ABHD8Q96I13 439 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 HEXIM2Q96MH2 286 aaKnown RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 GIMAP4Q9NUV9 329 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 SCHIP1Q9P0W5 487 aaPredicted RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 H7C4K7 107 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 LRRC47Q8N1G4 583 aaKnown RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 COG4Q9H9E3 785 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 NMRK1Q9NWW6 199 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 RSPH14Q9UHP6 348 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 PPP1R12AO14974 1030 aaPredicted RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 SLC25A27O95847 323 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 SYF2O95926 243 aaKnown RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 ERCC3P19447 782 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 ZNF445P59923 1031 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 RNASE9P60153 205 aaKnown RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 Q3C1V9 767 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 CEP57Q86XR8 500 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 SLC16A10Q8TF71 515 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 MRPL48Q96GC5 212 aaKnown RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 KDM6AO15550 1401 aaPredicted RBP7.96□□□□□ -1.14
MED28-201ENST00000237380 KPNA7A9QM74 516 aa7.96□□□□□ -1.14
MED28-201ENST00000237380 NDUFAB1O14561 156 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms