RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 SH3BGRP55822 239 aaPredicted RBP14.4□□□□□ -0.1
NEK4-201ENST00000233027 ARL6IP4Q66PJ3 421 aaKnown RBP14.4□□□□□ -0.1
NEK4-201ENST00000233027 STRBPQ96SI9 672 aaKnown RBP14.4□□□□□ -0.1
NEK4-201ENST00000233027 DNAJC12Q9UKB3 198 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 ESYT3A0FGR9 886 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 LGALS16A8MUM7 142 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 PRPSAP2O60256 369 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 STMN1P16949 149 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 HEXIM2Q96MH2 286 aaKnown RBP14.4□□□□□ -0.1
NEK4-201ENST00000233027 ZCCHC17Q9NP64 241 aaKnown RBP14.4□□□□□ -0.1
NEK4-201ENST00000233027 PACSIN2Q9UNF0 486 aaPredicted RBP14.4□□□□□ -0.1
NEK4-201ENST00000233027 HEG1Q9ULI3 1381 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 GOLGA8MH3BSY2 632 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 MED7O43513 233 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 SETSIPP0DME0 302 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 PTPREP23469 700 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 MORC4Q8TE76 937 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 TLK1Q9UKI8 766 aa14.4□□□□□ -0.1
NEK4-201ENST00000233027 TEX33O43247 280 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 ARL4AP40617 200 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 ART3Q13508 389 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 THOC5Q13769 683 aaKnown RBP14.39□□□□□ -0.11
NEK4-201ENST00000233027 PASD1Q8IV76 773 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 TTC17Q96AE7 1141 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.39□□□□□ -0.11
NEK4-201ENST00000233027 PRDM15P57071 1507 aaPredicted RBP14.39□□□□□ -0.11
NEK4-201ENST00000233027 H0Y3Z8 333 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 MAPK13O15264 365 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.39□□□□□ -0.11
NEK4-201ENST00000233027 FAM182BQ5T319 152 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 SUSD4Q5VX71 490 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 FAM47EQ6ZV65 393 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 SULF1Q8IWU6 871 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 CCHCR1Q8TD31 782 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 FOXN1O15353 648 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 TADA3O75528 432 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 MARK3P27448 753 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 CDC27P30260 824 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 PEX3P56589 373 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 HSP90AA5PQ58FG0 334 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 CENPUQ71F23 418 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 PITPNM3Q9BZ71 974 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 CEP72Q9P209 647 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 USP17L5A8MUK1 530 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 ZNF211Q13398 564 aaPredicted RBP14.39□□□□□ -0.11
NEK4-201ENST00000233027 ANGPTL2Q9UKU9 493 aa14.39□□□□□ -0.11
NEK4-201ENST00000233027 CDK12Q9NYV4 1490 aaPredicted RBP14.39□□□□□ -0.11
NEK4-201ENST00000233027 KITP10721 976 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 MAGOHP61326 146 aaKnown RBP14.38□□□□□ -0.11
NEK4-201ENST00000233027 RSBN1LQ6PCB5 846 aaPredicted RBP14.38□□□□□ -0.11
NEK4-201ENST00000233027 UNC13DQ70J99 1090 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 RYBPQ8N488 228 aaPredicted RBP14.38□□□□□ -0.11
NEK4-201ENST00000233027 SPC25Q9HBM1 224 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 SLC5A4Q9NY91 659 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 ZDHHC9Q9Y397 364 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 GSTA4O15217 222 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 FOXD4Q12950 439 aaPredicted RBP14.38□□□□□ -0.11
NEK4-201ENST00000233027 FAF2Q96CS3 445 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 BPIFA3Q9BQP9 254 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 CEP170Q5SW79 1584 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 ZNF18P17022 549 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 KCNV2Q8TDN2 545 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 TMEM260Q9NX78 707 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 THEGQ9P2T0 379 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 GOLGA8QA0A0J9YX86 632 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 GOLGA8OA6NCC3 632 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 EIF4E1BA6NMX2 242 aaKnown RBP14.38□□□□□ -0.11
NEK4-201ENST00000233027 GOLGA8NF8WBI6 632 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 SNAP23O00161 211 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 SRGAP2CP0DJJ0 459 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 MAGEA9P43362 315 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 ZNF394Q53GI3 561 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 TADA2BQ86TJ2 420 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 CHMP6Q96FZ7 201 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 TRAIPQ9BWF2 469 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 SAMD9LQ8IVG5 1584 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 IQANK1A0A1B0GTG1 560 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 SERPINB2P05120 415 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 CYP2E1P05181 493 aaPredicted RBP14.38□□□□□ -0.11
NEK4-201ENST00000233027 PSMA2P25787 234 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 TMED1Q13445 227 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 SFR1Q86XK3 245 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 TTLL11Q8NHH1 800 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 EXT2Q93063 718 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 ANAPC7Q9UJX3 599 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 ROBO2Q9HCK4 1378 aa14.38□□□□□ -0.11
NEK4-201ENST00000233027 KIF28PB7ZC32 967 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 EIF2AK2P19525 551 aaKnown RBP14.37□□□□□ -0.11
NEK4-201ENST00000233027 RSRC2Q7L4I2 434 aaKnown RBP14.37□□□□□ -0.11
NEK4-201ENST00000233027 MARCH10Q8NA82 808 aaPredicted RBP14.37□□□□□ -0.11
NEK4-201ENST00000233027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.37□□□□□ -0.111e-6■■□□□ 13.7
NEK4-201ENST00000233027 E9PMD0 336 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 EEF1B2P24534 225 aaKnown RBP14.37□□□□□ -0.11
NEK4-201ENST00000233027 INPP1P49441 399 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 IQCB1Q15051 598 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 HLFQ16534 295 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 OSBPL9Q96SU4 736 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 SH3GLB2Q9NR46 395 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 ABCF3Q9NUQ8 709 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 ZBED1O96006 694 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms