RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 EHBP1Q8NDI1 1231 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 GOLGA1Q92805 767 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 CCDC42Q96M95 316 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 ARID3AQ99856 593 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 KCNH7Q9NS40 1196 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 OGFRQ9NZT2 677 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 CNOT7Q9UIV1 285 aaKnown RBP21.1■□□□□ 0.97
YBX3-201ENST00000228251 CD2APQ9Y5K6 639 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 DICER1Q9UPY3 1922 aaKnown RBP21.1■□□□□ 0.97
YBX3-201ENST00000228251 RBAK-RBAKDNI3L0D1 243 aa21.09■□□□□ 0.97
YBX3-201ENST00000228251 SLC16A3O15427 465 aaKnown RBP21.09■□□□□ 0.97
YBX3-201ENST00000228251 CALUO43852 315 aaPredicted RBP21.09■□□□□ 0.97
YBX3-201ENST00000228251 CHMP4BP1P59074 171 aa21.09■□□□□ 0.97
YBX3-201ENST00000228251 RASSF7Q02833 373 aa21.09■□□□□ 0.97
YBX3-201ENST00000228251 KCNA1Q09470 495 aa21.09■□□□□ 0.97
YBX3-201ENST00000228251 SAMD1Q6SPF0 538 aaPredicted RBP21.09■□□□□ 0.97
YBX3-201ENST00000228251 BORCS6Q96GS4 357 aa21.09■□□□□ 0.97
YBX3-201ENST00000228251 NUCKS1Q9H1E3 243 aaKnown RBP21.09■□□□□ 0.97
YBX3-201ENST00000228251 SEL1LQ9UBV2 794 aa21.09■□□□□ 0.97
YBX3-201ENST00000228251 ODF2LQ9ULJ1 636 aa21.09■□□□□ 0.97
YBX3-201ENST00000228251 UBE4BO95155 1302 aa21.09■□□□□ 0.97
YBX3-201ENST00000228251 AKAP3O75969 853 aa21.08■□□□□ 0.97
YBX3-201ENST00000228251 TFRCP02786 760 aaKnown RBP21.08■□□□□ 0.97
YBX3-201ENST00000228251 GUCY2CP25092 1073 aa21.08■□□□□ 0.97
YBX3-201ENST00000228251 KCNH2Q12809 1159 aa21.08■□□□□ 0.97
YBX3-201ENST00000228251 MAPK7Q13164 816 aa21.08■□□□□ 0.97
YBX3-201ENST00000228251 TBC1D10BQ4KMP7 808 aaPredicted RBP21.08■□□□□ 0.97
YBX3-201ENST00000228251 LXNQ9BS40 222 aa21.08■□□□□ 0.97
YBX3-201ENST00000228251 LSM14BQ9BX40 385 aaKnown RBP21.08■□□□□ 0.97
YBX3-201ENST00000228251 STRA6Q9BX79 667 aa21.08■□□□□ 0.97
YBX3-201ENST00000228251 EPC1Q9H2F5 836 aa21.08■□□□□ 0.97
YBX3-201ENST00000228251 RAVER2Q9HCJ3 691 aaKnown RBP21.08■□□□□ 0.97
YBX3-201ENST00000228251 MYO6Q9UM54 1294 aa21.08■□□□□ 0.97
YBX3-201ENST00000228251 MYH10P35580 1976 aa21.08■□□□□ 0.96
YBX3-201ENST00000228251 PJA2O43164 708 aa21.08■□□□□ 0.96
YBX3-201ENST00000228251 NR3C1P04150 777 aa21.08■□□□□ 0.96
YBX3-201ENST00000228251 ITGB3BPQ13352 177 aaPredicted RBP21.08■□□□□ 0.96
YBX3-201ENST00000228251 MTMR2Q13614 643 aa21.08■□□□□ 0.96
YBX3-201ENST00000228251 TKFCQ3LXA3 575 aa21.08■□□□□ 0.96
YBX3-201ENST00000228251 TEX35Q5T0J7 233 aa21.08■□□□□ 0.96
YBX3-201ENST00000228251 AGO4Q9HCK5 861 aaKnown RBP21.08■□□□□ 0.96
YBX3-201ENST00000228251 POLD4Q9HCU8 107 aa21.08■□□□□ 0.96
YBX3-201ENST00000228251 JADE2Q9NQC1 790 aa21.08■□□□□ 0.96
YBX3-201ENST00000228251 ARMCX3Q9UH62 379 aaPredicted RBP21.08■□□□□ 0.96
YBX3-201ENST00000228251 PCDHA13Q9Y5I0 950 aa21.08■□□□□ 0.96
YBX3-201ENST00000228251 DUSP10Q9Y6W6 482 aa21.08■□□□□ 0.96
YBX3-201ENST00000228251 SFI1A8K8P3 1242 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 PPP1R37O75864 691 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 FAM13AO94988 1023 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 IPO7O95373 1038 aaKnown RBP21.07■□□□□ 0.96
YBX3-201ENST00000228251 GCNT3O95395 438 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 ALAS1P13196 640 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 DAW1Q8N136 415 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 TSGA10Q9BZW7 698 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 PARVGQ9HBI0 331 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 PLCB1Q9NQ66 1216 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 PNMA2Q9UL42 364 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 BCS1LQ9Y276 419 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 WDR90Q96KV7 1748 aa21.07■□□□□ 0.96
YBX3-201ENST00000228251 ZNF541Q9H0D2 1346 aa21.06■□□□□ 0.96
YBX3-201ENST00000228251 ATP1A1P05023 1023 aaKnown RBP21.06■□□□□ 0.96
YBX3-201ENST00000228251 FDX1P10109 184 aa21.06■□□□□ 0.96
YBX3-201ENST00000228251 NMT1P30419 496 aaKnown RBP21.06■□□□□ 0.96
YBX3-201ENST00000228251 USP14P54578 494 aa21.06■□□□□ 0.96
YBX3-201ENST00000228251 APBA1Q02410 837 aa21.06■□□□□ 0.96
YBX3-201ENST00000228251 SPA17Q15506 151 aa21.06■□□□□ 0.96
YBX3-201ENST00000228251 CACNA2D4Q7Z3S7 1137 aa21.06■□□□□ 0.96
YBX3-201ENST00000228251 SCYL3Q8IZE3 742 aa21.06■□□□□ 0.96
YBX3-201ENST00000228251 REPS2Q8NFH8 660 aa21.06■□□□□ 0.96
YBX3-201ENST00000228251 RPAP3Q9H6T3 665 aaPredicted RBP21.06■□□□□ 0.96
YBX3-201ENST00000228251 AIPL1Q9NZN9 384 aa21.06■□□□□ 0.96
YBX3-201ENST00000228251 ANO9A1A5B4 782 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 SPDYE4A6NLX3 237 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 FLOT1O75955 427 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 LYPLA2O95372 231 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 CASP4P49662 377 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 TUBB4BP68371 445 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 ZNF720Q7Z2F6 126 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 CPXCR1Q8N123 301 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 MSANTD4Q8NCY6 345 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 SLC35C1Q96A29 364 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 TAAR1Q96RJ0 339 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 CRACR2AQ9BSW2 395 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 IFIH1Q9BYX4 1025 aaKnown RBP21.05■□□□□ 0.96
YBX3-201ENST00000228251 ANKZF1Q9H8Y5 726 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 METTL14Q9HCE5 456 aaKnown RBP21.05■□□□□ 0.96
YBX3-201ENST00000228251 NLRC4Q9NPP4 1024 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 PUF60Q9UHX1 559 aaKnown RBP21.05■□□□□ 0.96
YBX3-201ENST00000228251 KIAA1217Q5T5P2 1943 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 AFPP02771 609 aaKnown RBP21.05■□□□□ 0.96
YBX3-201ENST00000228251 RPL13P26373 211 aaKnown RBP21.05■□□□□ 0.96
YBX3-201ENST00000228251 BACE1P56817 501 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 POLR2FP61218 127 aaKnown RBP21.05■□□□□ 0.96
YBX3-201ENST00000228251 RPS6P62753 249 aaKnown RBP21.05■□□□□ 0.96
YBX3-201ENST00000228251 KIF5AQ12840 1032 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 DCAF15Q66K64 600 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 MYCT1Q8N699 235 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 BANK1Q8NDB2 785 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 C12orf42Q96LP6 360 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 PARD6BQ9BYG5 372 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms