RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 NPAS4Q8IUM7 802 aa18.02■□□□□ 0.48
NME3-201ENST00000219302 SPPL3Q8TCT6 385 aa18.02■□□□□ 0.48
NME3-201ENST00000219302 TRAPPC12Q8WVT3 735 aa18.02■□□□□ 0.48
NME3-201ENST00000219302 TNPO1Q92973 898 aaKnown RBP18.02■□□□□ 0.48
NME3-201ENST00000219302 CELF4Q9BZC1 486 aaKnown RBP18.02■□□□□ 0.48
NME3-201ENST00000219302 AZI2Q9H6S1 392 aa18.02■□□□□ 0.48
NME3-201ENST00000219302 KDM3AQ9Y4C1 1321 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 IGKV6D-21A0A0A0MT36 114 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 MEIS1O00470 390 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 LINC01565O15544 149 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 TBX10O75333 385 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 ITGB1P05556 798 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 TMEM62Q0P6H9 643 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 ITGB3BPQ13352 177 aaPredicted RBP18.01■□□□□ 0.47
NME3-201ENST00000219302 CLUL1Q15846 466 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 TEX2Q8IWB9 1127 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 NME8Q8N427 588 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 TMX1Q9H3N1 280 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 IGFLR1Q9H665 355 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 AGO4Q9HCK5 861 aaKnown RBP18.01■□□□□ 0.47
NME3-201ENST00000219302 RIC8AQ9NPQ8 531 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 TRPC6Q9Y210 931 aa18.01■□□□□ 0.47
NME3-201ENST00000219302 TRIOO75962 3097 aa18■□□□□ 0.47
NME3-201ENST00000219302 SMIM35A0A1B0GVV1 85 aa18■□□□□ 0.47
NME3-201ENST00000219302 FOSP01100 380 aaPredicted RBP18■□□□□ 0.47
NME3-201ENST00000219302 CEP55Q53EZ4 464 aa18■□□□□ 0.47
NME3-201ENST00000219302 MTHFD1LQ6UB35 978 aa18■□□□□ 0.47
NME3-201ENST00000219302 MICU3Q86XE3 530 aa18■□□□□ 0.47
NME3-201ENST00000219302 KLHL23Q8NBE8 558 aa18■□□□□ 0.47
NME3-201ENST00000219302 PGBD1Q96JS3 809 aa18■□□□□ 0.47
NME3-201ENST00000219302 MSLNLQ96KJ4 702 aa18■□□□□ 0.47
NME3-201ENST00000219302 UIMC1Q96RL1 719 aa18■□□□□ 0.47
NME3-201ENST00000219302 SDF4Q9BRK5 362 aa18■□□□□ 0.47
NME3-201ENST00000219302 UPF3BQ9BZI7 483 aaKnown RBP18■□□□□ 0.47
NME3-201ENST00000219302 CNTNAP5Q8WYK1 1306 aa17.99■□□□□ 0.47
NME3-201ENST00000219302 M0QZ92 97 aa17.99■□□□□ 0.47
NME3-201ENST00000219302 STAG3L1P0CL83 205 aa17.99■□□□□ 0.47
NME3-201ENST00000219302 KLRC1P26715 233 aa17.99■□□□□ 0.47
NME3-201ENST00000219302 KRT76Q01546 638 aa17.99■□□□□ 0.47
NME3-201ENST00000219302 EXOSC10Q01780 885 aaKnown RBP17.99■□□□□ 0.47
NME3-201ENST00000219302 SMAD4Q13485 552 aaKnown RBP17.99■□□□□ 0.47
NME3-201ENST00000219302 CSPP1Q1MSJ5 1256 aa17.99■□□□□ 0.47
NME3-201ENST00000219302 APOA5Q6Q788 366 aa17.99■□□□□ 0.47
NME3-201ENST00000219302 CLEC1BQ9P126 229 aa17.99■□□□□ 0.47
NME3-201ENST00000219302 CD207Q9UJ71 328 aa17.99■□□□□ 0.47
NME3-201ENST00000219302 V9GY48 417 aaPredicted RBP17.99■□□□□ 0.47
NME3-201ENST00000219302 STXBP3O00186 592 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 EYA4O95677 639 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 CCNE2O96020 404 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 SCG2P13521 617 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 CLK2P49760 499 aaKnown RBP17.98■□□□□ 0.47
NME3-201ENST00000219302 GATMP50440 423 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 SLC26A2P50443 739 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 NAPAP54920 295 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 IRX6P78412 446 aaPredicted RBP17.98■□□□□ 0.47
NME3-201ENST00000219302 PAK2Q13177 524 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 ABHD15Q6UXT9 468 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 FAM43BQ6ZT52 329 aaPredicted RBP17.98■□□□□ 0.47
NME3-201ENST00000219302 ADGRD2Q7Z7M1 963 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 KIAA0319LQ8IZA0 1049 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 POF1BQ8WVV4 589 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 ANO3Q9BYT9 981 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 CDHR5Q9HBB8 845 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 ERVK-5Q9HDB9 667 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 RBM28Q9NW13 759 aaKnown RBP17.98■□□□□ 0.47
NME3-201ENST00000219302 BRPF3Q9ULD4 1205 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 LOXHD1Q8IVV2 1947 aa17.98■□□□□ 0.47
NME3-201ENST00000219302 SMCO2A6NFE2 343 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 DHX15O43143 795 aaKnown RBP17.97■□□□□ 0.47
NME3-201ENST00000219302 HBP1O60381 514 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 MGEA5O60502 916 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 CSPG5O95196 566 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 SREBF1P36956 1147 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 TMEM266Q2M3C6 531 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 PAN2Q504Q3 1202 aaKnown RBP17.97■□□□□ 0.47
NME3-201ENST00000219302 HERC4Q5GLZ8 1057 aaPredicted RBP17.97■□□□□ 0.47
NME3-201ENST00000219302 PPP1R18Q6NYC8 613 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 SYNE3Q6ZMZ3 975 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 NIPA1Q7RTP0 329 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 EFHBQ8N7U6 833 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 POP1Q99575 1024 aaKnown RBP17.97■□□□□ 0.47
NME3-201ENST00000219302 ANO2Q9NQ90 1003 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 FAM217BQ9NTX9 383 aaPredicted RBP17.97■□□□□ 0.47
NME3-201ENST00000219302 TMEM260Q9NX78 707 aa17.97■□□□□ 0.47
NME3-201ENST00000219302 ATP4AP20648 1035 aa17.96■□□□□ 0.47
NME3-201ENST00000219302 SARSP49591 514 aaKnown RBP17.96■□□□□ 0.47
NME3-201ENST00000219302 ADCY7P51828 1080 aa17.96■□□□□ 0.47
NME3-201ENST00000219302 NFX1Q12986 1120 aaKnown RBP17.96■□□□□ 0.47
NME3-201ENST00000219302 RNF135Q8IUD6 432 aa17.96■□□□□ 0.47
NME3-201ENST00000219302 ATP8B4Q8TF62 1192 aa17.96■□□□□ 0.47
NME3-201ENST00000219302 TMEM40Q8WWA1 233 aa17.96■□□□□ 0.47
NME3-201ENST00000219302 CRYGNQ8WXF5 182 aa17.96■□□□□ 0.47
NME3-201ENST00000219302 NEK1Q96PY6 1258 aa17.96■□□□□ 0.47
NME3-201ENST00000219302 BARHL2Q9NY43 387 aa17.96■□□□□ 0.47
NME3-201ENST00000219302 MUTYHQ9UIF7 546 aa17.96■□□□□ 0.47
NME3-201ENST00000219302 NOC2LQ9Y3T9 749 aaKnown RBP17.96■□□□□ 0.47
NME3-201ENST00000219302 ZNF318Q5VUA4 2279 aa17.96■□□□□ 0.47
NME3-201ENST00000219302 TECTAO75443 2155 aa17.96■□□□□ 0.46
NME3-201ENST00000219302 WDFY4Q6ZS81 3184 aa17.95■□□□□ 0.46
NME3-201ENST00000219302 ZBTB42B2RXF5 422 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms