RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 WHAMMQ8TF30 809 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 RNPC3Q96LT9 517 aaKnown RBP18.91■□□□□ 0.62
USB1-201ENST00000219281 ANO3Q9BYT9 981 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 TMEM59LQ9UK28 342 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 A6NNZ2 444 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 G3V3G9 751 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 MEIS1O00470 390 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 ZEB2O60315 1214 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 UCHL3P15374 230 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 PSMC6P62333 389 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 SF3B2Q13435 895 aaKnown RBP18.91■□□□□ 0.62
USB1-201ENST00000219281 QRICH1Q2TAL8 776 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 TUBB8Q3ZCM7 444 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 DCAF8Q5TAQ9 597 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
USB1-201ENST00000219281 PCDHA1Q9Y5I3 950 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 BTNL10A8MVZ5 291 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 KIF4AO95239 1232 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 AFPP02771 609 aaKnown RBP18.9■□□□□ 0.62
USB1-201ENST00000219281 LIG3P49916 1009 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 USP11P51784 963 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 GIT2Q14161 759 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 KDM7AQ6ZMT4 941 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 CATSPER3Q86XQ3 398 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 CD302Q8IX05 232 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 TEKT1Q969V4 418 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 ARMCX3Q9UH62 379 aaPredicted RBP18.9■□□□□ 0.62
USB1-201ENST00000219281 PITPNM2Q9BZ72 1349 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 NDUFAB1O14561 156 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 CEP104O60308 925 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 CPP00450 1065 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 MYBP10242 640 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 CHRNA5P30532 468 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 CRKP46108 304 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 PABPC4Q13310 644 aaKnown RBP eCLIP18.9■□□□□ 0.622e-6■■□□□ 11.4
USB1-201ENST00000219281 C10orf76Q5T2E6 689 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 FRMD5Q7Z6J6 570 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 PLCB1Q9NQ66 1216 aa18.9■□□□□ 0.62
USB1-201ENST00000219281 ZNF219Q9P2Y4 722 aaPredicted RBP18.9■□□□□ 0.62
USB1-201ENST00000219281 QSER1Q2KHR3 1735 aa18.89■□□□□ 0.62
USB1-201ENST00000219281 H0YIN7 160 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 CLSTN1O94985 981 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 PON1P27169 355 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 HOXD13P35453 343 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 GUCY1A3Q02108 690 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 EXOC3L4Q17RC7 722 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 KNOP1Q1ED39 458 aaKnown RBP18.89■□□□□ 0.61
USB1-201ENST00000219281 DCAF17Q5H9S7 520 aaPredicted RBP18.89■□□□□ 0.61
USB1-201ENST00000219281 SFR1Q86XK3 245 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 TAF1DQ9H5J8 278 aaPredicted RBP18.89■□□□□ 0.61
USB1-201ENST00000219281 NAGPAQ9UK23 515 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 TRAF3IP3Q9Y228 551 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 CYP3A7-CYP3A51PA0A087WV96 503 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 CYP3A7P24462 503 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 ERVK-9P63128 1117 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 HLTFQ14527 1009 aaKnown RBP eCLIP18.89■□□□□ 0.61
USB1-201ENST00000219281 MAATS1Q7Z4T9 603 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 KIAA0825Q8IV33 1275 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 SLFN12Q8IYM2 578 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 PROCA1Q8NCQ7 364 aaPredicted RBP18.89■□□□□ 0.61
USB1-201ENST00000219281 RBM46Q8TBY0 533 aaKnown RBP18.89■□□□□ 0.61
USB1-201ENST00000219281 PBKQ96KB5 322 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 REEP2Q9BRK0 252 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 PLAAQ9Y263 795 aa18.89■□□□□ 0.61
USB1-201ENST00000219281 BZW2Q9Y6E2 419 aaKnown RBP18.89■□□□□ 0.61
USB1-201ENST00000219281 ADAMTSL1Q8N6G6 1762 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 CES2O00748 559 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 NR1D1P20393 614 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 HSPA9P38646 679 aaKnown RBP18.88■□□□□ 0.61
USB1-201ENST00000219281 PRR16Q569H4 304 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 STYK1Q6J9G0 422 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 ALKBH5Q6P6C2 394 aaKnown RBP18.88■□□□□ 0.61
USB1-201ENST00000219281 ATP6V1G3Q96LB4 118 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 ZDHHC15Q96MV8 337 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 AP1M1Q9BXS5 423 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 ISCUQ9H1K1 167 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 DNM3Q9UQ16 869 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 ARFGEF1Q9Y6D6 1849 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 SLC26A4O43511 780 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 AKAP3O75969 853 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 ERLIN2O94905 339 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 XRCC5P13010 732 aaKnown RBP18.88■□□□□ 0.61
USB1-201ENST00000219281 LSP1P33241 339 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 CACNB3P54284 484 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 SPIRE1Q08AE8 756 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 DACT2Q5SW24 774 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 CEP85LQ5SZL2 805 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 TCERG1LQ5VWI1 586 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 LRRC57Q8N9N7 239 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 SCFD2Q8WU76 684 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 C7orf43Q8WVR3 580 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 MBOAT7Q96N66 472 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 GLT8D2Q9H1C3 349 aa18.88■□□□□ 0.61
USB1-201ENST00000219281 AJAP1Q9UKB5 411 aaPredicted RBP18.88■□□□□ 0.61
USB1-201ENST00000219281 SLX4Q8IY92 1834 aa18.87■□□□□ 0.61
USB1-201ENST00000219281 IFI16Q16666 785 aaKnown RBP18.87■□□□□ 0.61
USB1-201ENST00000219281 STRIP1Q5VSL9 837 aa18.87■□□□□ 0.61
USB1-201ENST00000219281 SYT2Q8N9I0 419 aaPredicted RBP18.87■□□□□ 0.61
USB1-201ENST00000219281 ETNPPLQ8TBG4 499 aa18.87■□□□□ 0.61
USB1-201ENST00000219281 P2RX7Q99572 595 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms