RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 IER5Q5VY09 327 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 POTEBQ6S5H4 581 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 NIPA1Q7RTP0 329 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 PLA2G4DQ86XP0 818 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 LINC01599Q8WXQ3 324 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 RC3H2Q9HBD1 1191 aaKnown RBP17.07■□□□□ 0.32
UPK3A-201ENST00000216211 PCDHA2Q9Y5H9 948 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 NID2Q14112 1375 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 ADGRA3Q8IWK6 1321 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 IGLV3-22A0A075B6J6 115 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 IGKV6D-21A0A0A0MT36 114 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 CCDC196A0A1B0GTZ2 297 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 M0QZ92 97 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 BACH1O14867 736 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 RPLP2P05387 115 aaKnown RBP17.06■□□□□ 0.32
UPK3A-201ENST00000216211 COL9A1P20849 921 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 KCNA5P22460 613 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 PKN1Q16512 942 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 MTHFD1LQ6UB35 978 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 ABHD15Q6UXT9 468 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 PHKBQ93100 1093 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 ZMYND12Q9H0C1 365 aa17.06■□□□□ 0.32
UPK3A-201ENST00000216211 SMIM35A0A1B0GVV1 85 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 DHX15O43143 795 aaKnown RBP17.05■□□□□ 0.32
UPK3A-201ENST00000216211 PRPF3O43395 683 aaKnown RBP17.05■□□□□ 0.32
UPK3A-201ENST00000216211 PPFIA3O75145 1194 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 CYP3A4P08684 503 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 LINC00271P0C7V0 271 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 RPS6KB1P23443 525 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 TIGD5Q53EQ6 642 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 FAM160B1Q5W0V3 765 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 RTN4RL1Q86UN2 441 aaPredicted RBP17.05■□□□□ 0.32
UPK3A-201ENST00000216211 CCDC60Q8IWA6 550 aaPredicted RBP17.05■□□□□ 0.32
UPK3A-201ENST00000216211 BANK1Q8NDB2 785 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 CRYGNQ8WXF5 182 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 ZNF689Q96CS4 500 aaPredicted RBP17.05■□□□□ 0.32
UPK3A-201ENST00000216211 CELF4Q9BZC1 486 aaKnown RBP17.05■□□□□ 0.32
UPK3A-201ENST00000216211 C6orf50Q9HD87 102 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 SQORQ9Y6N5 450 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 MYO7AQ13402 2215 aa17.05■□□□□ 0.32
UPK3A-201ENST00000216211 FNDC1Q4ZHG4 1894 aaPredicted RBP17.05■□□□□ 0.32
UPK3A-201ENST00000216211 IGSF9BQ9UPX0 1349 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 PLXNA4Q9HCM2 1894 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 ESYT2A0FGR8 921 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 IPO5O00410 1097 aaKnown RBP17.04■□□□□ 0.32
UPK3A-201ENST00000216211 HBP1O60381 514 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 KLRC1P26715 233 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 BMPR1AP36894 532 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 SLC26A2P50443 739 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 BTG3Q14201 252 aaPredicted RBP17.04■□□□□ 0.32
UPK3A-201ENST00000216211 LEXMQ3ZCV2 418 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 TCEAL5Q5H9L2 206 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 PDXDC2PQ6P474 469 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 REXO1Q8N1G1 1221 aaKnown RBP17.04■□□□□ 0.32
UPK3A-201ENST00000216211 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.04■□□□□ 0.32
UPK3A-201ENST00000216211 CCDC12Q8WUD4 166 aaPredicted RBP17.04■□□□□ 0.32
UPK3A-201ENST00000216211 ZNF577Q9BSK1 485 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 ZNF302Q9NR11 478 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 RAPGEFL1Q9UHV5 662 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 PADI3Q9ULW8 664 aa17.04■□□□□ 0.32
UPK3A-201ENST00000216211 RBM19Q9Y4C8 960 aaKnown RBP17.04■□□□□ 0.32
UPK3A-201ENST00000216211 C5orf67F2Z3F1 127 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 DGKIO75912 1065 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 ATP4AP20648 1035 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 KRT76Q01546 638 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 PAK2Q13177 524 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 NTRK3Q16288 839 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 TMEM266Q2M3C6 531 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 SWSAP1Q6NVH7 229 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 MIS18BP1Q6P0N0 1132 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 NME8Q8N427 588 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 RASGRP4Q8TDF6 673 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 ATP8B4Q8TF62 1192 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 CLP1Q92989 425 aaKnown RBP17.03■□□□□ 0.32
UPK3A-201ENST00000216211 SLC26A6Q9BXS9 759 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 FTHL17Q9BXU8 183 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 AGXT2Q9BYV1 514 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 NSUN3Q9H649 340 aaKnown RBP17.03■□□□□ 0.32
UPK3A-201ENST00000216211 RWDD3Q9Y3V2 267 aa17.03■□□□□ 0.32
UPK3A-201ENST00000216211 KDM3AQ9Y4C1 1321 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 GRM6O15303 877 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 RB1P06400 928 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 GNA11P29992 359 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 CCT2P78371 535 aaKnown RBP17.02■□□□□ 0.32
UPK3A-201ENST00000216211 SETQ01105 290 aaPredicted RBP17.02■□□□□ 0.32
UPK3A-201ENST00000216211 AKAP17AQ02040 695 aaKnown RBP17.02■□□□□ 0.32
UPK3A-201ENST00000216211 ZNF484Q5JVG2 852 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 MCTP2Q6DN12 878 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 EP400NLQ6ZTU2 488 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 FBXL16Q8N461 479 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 KHSRPQ92945 711 aaKnown RBP eCLIP17.02■□□□□ 0.32
UPK3A-201ENST00000216211 C11orf84Q9BUA3 381 aaPredicted RBP17.02■□□□□ 0.32
UPK3A-201ENST00000216211 EPHX3Q9H6B9 360 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 CDHR5Q9HBB8 845 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 GINS2Q9Y248 185 aa17.02■□□□□ 0.32
UPK3A-201ENST00000216211 COL1A2P08123 1366 aa17.02■□□□□ 0.31
UPK3A-201ENST00000216211 ZBTB42B2RXF5 422 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 H3BQ06 376 aaPredicted RBP17.01■□□□□ 0.31
UPK3A-201ENST00000216211 REC8O95072 547 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 CSPG5O95196 566 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms