RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 ATG7O95352 703 aa28.66■■■□□ 2.18
VEGFA-230ENST00000640482 IGFBP4P22692 258 aa28.66■■■□□ 2.18
VEGFA-230ENST00000640482 STAT5BP51692 787 aa28.66■■■□□ 2.18
VEGFA-230ENST00000640482 NLRP5P59047 1200 aa28.66■■■□□ 2.18
VEGFA-230ENST00000640482 FAM26DQ5JW98 314 aa28.66■■■□□ 2.18
VEGFA-230ENST00000640482 RASGRP4Q8TDF6 673 aa28.66■■■□□ 2.18
VEGFA-230ENST00000640482 LARP6Q9BRS8 491 aaKnown RBP28.66■■■□□ 2.18
VEGFA-230ENST00000640482 TRPC6Q9Y210 931 aa28.66■■■□□ 2.18
VEGFA-230ENST00000640482 MBLAC1A4D2B0 266 aaPredicted RBP28.65■■■□□ 2.18
VEGFA-230ENST00000640482 DDX39AO00148 427 aaKnown RBP28.65■■■□□ 2.18
VEGFA-230ENST00000640482 IPO5O00410 1097 aaKnown RBP28.65■■■□□ 2.18
VEGFA-230ENST00000640482 EIF5BO60841 1220 aaKnown RBP28.65■■■□□ 2.18
VEGFA-230ENST00000640482 GJB5O95377 273 aa28.65■■■□□ 2.18
VEGFA-230ENST00000640482 DEXIO95424 95 aa28.65■■■□□ 2.18
VEGFA-230ENST00000640482 RPLP2P05387 115 aaKnown RBP28.65■■■□□ 2.18
VEGFA-230ENST00000640482 SLC26A2P50443 739 aa28.65■■■□□ 2.18
VEGFA-230ENST00000640482 ANAPC15P60006 121 aa28.65■■■□□ 2.18
VEGFA-230ENST00000640482 IGBP1P78318 339 aa28.65■■■□□ 2.18
VEGFA-230ENST00000640482 STK3Q13188 491 aa28.65■■■□□ 2.18
VEGFA-230ENST00000640482 ADGRE1Q14246 886 aa28.65■■■□□ 2.18
VEGFA-230ENST00000640482 RUFY4Q6ZNE9 571 aa28.65■■■□□ 2.18
VEGFA-230ENST00000640482 ZNF577Q9BSK1 485 aa28.65■■■□□ 2.18
VEGFA-230ENST00000640482 AMHP03971 560 aa28.64■■■□□ 2.18
VEGFA-230ENST00000640482 INSRRP14616 1297 aa28.64■■■□□ 2.18
VEGFA-230ENST00000640482 TAP1Q03518 808 aa28.64■■■□□ 2.18
VEGFA-230ENST00000640482 TMCO2Q7Z6W1 182 aaPredicted RBP28.64■■■□□ 2.18
VEGFA-230ENST00000640482 APBB2Q92870 758 aa28.64■■■□□ 2.18
VEGFA-230ENST00000640482 RAD9AQ99638 391 aa28.64■■■□□ 2.18
VEGFA-230ENST00000640482 TBC1D22BQ9NU19 505 aa28.64■■■□□ 2.18
VEGFA-230ENST00000640482 EYSQ5T1H1 3165 aa28.64■■■□□ 2.17
VEGFA-230ENST00000640482 DLL1O00548 723 aa28.63■■■□□ 2.17
VEGFA-230ENST00000640482 CCNE2O96020 404 aa28.63■■■□□ 2.17
VEGFA-230ENST00000640482 CIITAP33076 1130 aa28.63■■■□□ 2.17
VEGFA-230ENST00000640482 PLCB4Q15147 1175 aa28.63■■■□□ 2.17
VEGFA-230ENST00000640482 MARCH8Q5T0T0 291 aa28.63■■■□□ 2.17
VEGFA-230ENST00000640482 FAM160B1Q5W0V3 765 aa28.63■■■□□ 2.17
VEGFA-230ENST00000640482 TCEAL9Q9UHQ7 104 aa28.63■■■□□ 2.17
VEGFA-230ENST00000640482 CHD9Q3L8U1 2897 aa28.63■■■□□ 2.17
VEGFA-230ENST00000640482 BACH1O14867 736 aa28.62■■■□□ 2.17
VEGFA-230ENST00000640482 DHX15O43143 795 aaKnown RBP28.62■■■□□ 2.17
VEGFA-230ENST00000640482 MIS18BP1Q6P0N0 1132 aa28.62■■■□□ 2.17
VEGFA-230ENST00000640482 ABHD15Q6UXT9 468 aa28.62■■■□□ 2.17
VEGFA-230ENST00000640482 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.62■■■□□ 2.175e-35■■■□□ 16.9
VEGFA-230ENST00000640482 FAM177A1Q8N128 213 aaPredicted RBP28.62■■■□□ 2.17
VEGFA-230ENST00000640482 C22orf23Q9BZE7 217 aa28.62■■■□□ 2.17
VEGFA-230ENST00000640482 CERS4Q9HA82 394 aa28.62■■■□□ 2.17
VEGFA-230ENST00000640482 PTPRSQ13332 1948 aa28.62■■■□□ 2.17
VEGFA-230ENST00000640482 KAT6AQ92794 2004 aa28.62■■■□□ 2.17
VEGFA-230ENST00000640482 IGKV6D-21A0A0A0MT36 114 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 POTEB3A0JP26 581 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 CDKL5O76039 1030 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 CHRNA1P02708 482 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 MKRN4PQ13434 485 aaPredicted RBP28.61■■■□□ 2.17
VEGFA-230ENST00000640482 PRR16Q569H4 304 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 POTEBQ6S5H4 581 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 MYOCDQ8IZQ8 938 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 USP38Q8NB14 1042 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 DNAJB3Q8WWF6 145 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 PPM1EQ8WY54 764 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 IFIH1Q9BYX4 1025 aaKnown RBP28.61■■■□□ 2.17
VEGFA-230ENST00000640482 PCDHA4Q9UN74 947 aa28.61■■■□□ 2.17
VEGFA-230ENST00000640482 ARHGEF15O94989 841 aa28.6■■■□□ 2.17
VEGFA-230ENST00000640482 USP11P51784 963 aa28.6■■■□□ 2.17
VEGFA-230ENST00000640482 MGAT3Q09327 533 aa28.6■■■□□ 2.17
VEGFA-230ENST00000640482 ZNF746Q6NUN9 644 aaPredicted RBP28.6■■■□□ 2.17
VEGFA-230ENST00000640482 FAM117BQ6P1L5 589 aa28.6■■■□□ 2.17
VEGFA-230ENST00000640482 ARNTL2Q8WYA1 636 aa28.6■■■□□ 2.17
VEGFA-230ENST00000640482 OSBPL7Q9BZF2 842 aa28.6■■■□□ 2.17
VEGFA-230ENST00000640482 SLKQ9H2G2 1235 aaPredicted RBP28.6■■■□□ 2.17
VEGFA-230ENST00000640482 LCHNA4D1U4 455 aa28.59■■■□□ 2.17
VEGFA-230ENST00000640482 KRT76Q01546 638 aa28.59■■■□□ 2.17
VEGFA-230ENST00000640482 ANKRD1Q15327 319 aa28.59■■■□□ 2.17
VEGFA-230ENST00000640482 SMAP1Q8IYB5 467 aaPredicted RBP28.59■■■□□ 2.17
VEGFA-230ENST00000640482 UIMC1Q96RL1 719 aa28.59■■■□□ 2.17
VEGFA-230ENST00000640482 ZNF302Q9NR11 478 aa28.59■■■□□ 2.17
VEGFA-230ENST00000640482 PCDHA2Q9Y5H9 948 aa28.59■■■□□ 2.17
VEGFA-230ENST00000640482 GTPBP6O43824 516 aaPredicted RBP28.58■■■□□ 2.17
VEGFA-230ENST00000640482 HBP1O60381 514 aa28.58■■■□□ 2.17
VEGFA-230ENST00000640482 GHRP10912 638 aa28.58■■■□□ 2.17
VEGFA-230ENST00000640482 SCRN1Q12765 414 aa28.58■■■□□ 2.17
VEGFA-230ENST00000640482 GALNT17Q6IS24 598 aa28.58■■■□□ 2.17
VEGFA-230ENST00000640482 PDXDC2PQ6P474 469 aa28.58■■■□□ 2.17
VEGFA-230ENST00000640482 CCDC60Q8IWA6 550 aaPredicted RBP28.58■■■□□ 2.17
VEGFA-230ENST00000640482 ATP8B4Q8TF62 1192 aa28.58■■■□□ 2.17
VEGFA-230ENST00000640482 FAM49AQ9H0Q0 323 aaPredicted RBP28.58■■■□□ 2.17
VEGFA-230ENST00000640482 INSL6Q9Y581 213 aa28.58■■■□□ 2.17
VEGFA-230ENST00000640482 CDY2AQ9Y6F7 541 aa28.58■■■□□ 2.17
VEGFA-230ENST00000640482 UNC80Q8N2C7 3258 aa28.57■■■□□ 2.16
VEGFA-230ENST00000640482 RBAK-RBAKDNI3L0D1 243 aa28.57■■■□□ 2.16
VEGFA-230ENST00000640482 MRPS6P82932 125 aaKnown RBP28.57■■■□□ 2.16
VEGFA-230ENST00000640482 IER5Q5VY09 327 aa28.57■■■□□ 2.16
VEGFA-230ENST00000640482 SWSAP1Q6NVH7 229 aa28.57■■■□□ 2.16
VEGFA-230ENST00000640482 BLIDQ8IZY5 108 aa28.57■■■□□ 2.16
VEGFA-230ENST00000640482 DAGLBQ8NCG7 672 aa28.57■■■□□ 2.16
VEGFA-230ENST00000640482 TRAPPC12Q8WVT3 735 aa28.57■■■□□ 2.16
VEGFA-230ENST00000640482 LENG9Q96B70 501 aa28.57■■■□□ 2.16
VEGFA-230ENST00000640482 M0QZ92 97 aa28.56■■■□□ 2.16
VEGFA-230ENST00000640482 RFXAPO00287 272 aa28.56■■■□□ 2.16
VEGFA-230ENST00000640482 PFKFB2O60825 505 aa28.56■■■□□ 2.16
VEGFA-230ENST00000640482 CCDC85BQ15834 202 aaPredicted RBP28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms