RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 ERLIN1O75477 346 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 LCA5LO95447 670 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 FAM86B2P0C5J1 330 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 CTAGE8P0CG41 777 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 MCM3P25205 808 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 RPL13P26373 211 aaKnown RBP12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 CAP2P40123 477 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 EPS15P42566 896 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 HERVK_113P62684 666 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 PPP2R5CQ13362 524 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 GIT2Q14161 759 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 BMT2Q1RMZ1 405 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 FAM83BQ5T0W9 1011 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 IQCEQ6IPM2 695 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 POTEEQ6S8J3 1075 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 STXBP4Q6ZWJ1 553 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 FRMD5Q7Z6J6 570 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 CTAGE6Q86UF2 777 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 TRIM59Q8IWR1 403 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 CTAGE4Q8IX94 777 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 NEK9Q8TD19 979 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 DDX27Q96GQ7 796 aaKnown RBP12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 IRX2Q9BZI1 471 aaPredicted RBP12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 GBP3Q9H0R5 595 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 KCTD10Q9H3F6 313 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 DEF6Q9H4E7 631 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 VEZTQ9HBM0 779 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 METTL14Q9HCE5 456 aaKnown RBP12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 SEL1LQ9UBV2 794 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 TRAF3IP3Q9Y228 551 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 REXO2Q9Y3B8 237 aaKnown RBP12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 UBE4BO95155 1302 aa12.48□□□□□ -0.41
HNRNPU-221ENST00000639824 IGLV3-22A0A075B6J6 115 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 OPLAHO14841 1288 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 EIF3DO15371 548 aaKnown RBP eCLIP12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 SLC16A3O15427 465 aaKnown RBP12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 CFBP00751 764 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 SPATA31C1P0DKV0 1188 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 STAT3P40763 770 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 ECE1P42892 770 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 TGFB2P61812 414 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 JAG1P78504 1218 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 CBX1P83916 185 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 GABPB1Q06547 395 aaPredicted RBP12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 RRP1BQ14684 758 aaKnown RBP12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 TNIP1Q15025 636 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 LRRC41Q15345 812 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 KNOP1Q1ED39 458 aaKnown RBP12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 ARSHQ5FYA8 562 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 LRCH2Q5VUJ6 765 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 LRRN4CLQ8ND94 238 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 TRIM58Q8NG06 486 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 SCFD1Q8WVM8 642 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 LPAR1Q92633 364 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 SLC5A5Q92911 643 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 ZBED3Q96IU2 234 aaPredicted RBP12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 EIF2AK1Q9BQI3 630 aaKnown RBP12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 ARFGAP3Q9NP61 516 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 OLFML3Q9NRN5 406 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 FAM53CQ9NYF3 392 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 MAP3K20Q9NYL2 800 aaKnown RBP12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 EP400Q96L91 3159 aa12.47□□□□□ -0.41
HNRNPU-221ENST00000639824 AKR1B10O60218 316 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 TACC1O75410 805 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 RPS12P25398 132 aaKnown RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 HOXA13P31271 388 aaPredicted RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 SNAP25P60880 206 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 AMPD2Q01433 879 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 ADAM9Q13443 819 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 SLC9C1Q4G0N8 1177 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 CEP55Q53EZ4 464 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 PAPD7Q5XG87 772 aaKnown RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 PDXDC1Q6P996 788 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 EPM2AIP1Q7L775 607 aaPredicted RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 NIPA1Q7RTP0 329 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 MCF2L2Q86YR7 1114 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 ZNF687Q8N1G0 1237 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 ACER1Q8TDN7 264 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 HNRNPLLQ8WVV9 542 aaKnown RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 SECISBP2LQ93073 1101 aaKnown RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 GJA10Q969M2 543 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 EEF2KMTQ96G04 330 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 ALS2CR12Q96Q35 445 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 PURBQ96QR8 312 aaKnown RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 P2RX7Q99572 595 aaKnown RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 ARID3AQ99856 593 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 ZHX3Q9H4I2 956 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 ZNF277Q9NRM2 450 aaPredicted RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 FAM207AQ9NSI2 230 aaPredicted RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 TYW1Q9NV66 732 aaKnown RBP12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 SAR1BQ9Y6B6 198 aa12.46□□□□□ -0.41
HNRNPU-221ENST00000639824 WDR46O15213 610 aaKnown RBP12.46□□□□□ -0.42
HNRNPU-221ENST00000639824 PPP1R12BO60237 982 aaPredicted RBP12.46□□□□□ -0.42
HNRNPU-221ENST00000639824 GAS7O60861 476 aa12.46□□□□□ -0.42
HNRNPU-221ENST00000639824 PSMD10O75832 226 aa12.46□□□□□ -0.42
HNRNPU-221ENST00000639824 ZRANB2O95218 330 aaKnown RBP eCLIP12.46□□□□□ -0.42
HNRNPU-221ENST00000639824 SERPING1P05155 500 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms