RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-206ENST00000634451 ERICH2A1L162 156 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 MBTPS2O43462 519 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 RBM10P98175 930 aaKnown RBP14.82□□□□□ -0.04
LINC00339-206ENST00000634451 PAN2Q504Q3 1202 aaKnown RBP14.82□□□□□ -0.04
LINC00339-206ENST00000634451 ADHFE1Q8IWW8 467 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 ZNF689Q96CS4 500 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-206ENST00000634451 PGBD1Q96JS3 809 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 FBXL18Q96ME1 805 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 PHOX2BQ99453 314 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 SPZ1Q9BXG8 430 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 TUBE1Q9UJT0 475 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 NRCAMQ92823 1304 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 PLXNA4Q9HCM2 1894 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 ZDBF2Q9HCK1 2354 aa14.82□□□□□ -0.04
LINC00339-206ENST00000634451 MBLAC1A4D2B0 266 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-206ENST00000634451 PIK3CDO00329 1044 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 STAM2O75886 525 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 DGKIO75912 1065 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 ITGB1P05556 798 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 GNAT1P11488 350 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 ALADP13716 330 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 BTG3Q14201 252 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-206ENST00000634451 CRIPAKQ8N1N5 446 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 CCDC82Q8N4S0 544 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 CYP2W1Q8TAV3 490 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 CLP1Q92989 425 aaKnown RBP14.81□□□□□ -0.04
LINC00339-206ENST00000634451 RRP36Q96EU6 259 aaKnown RBP14.81□□□□□ -0.04
LINC00339-206ENST00000634451 SENP7Q9BQF6 1050 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 C11orf84Q9BUA3 381 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-206ENST00000634451 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 PLAGL2Q9UPG8 496 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 RBM8AQ9Y5S9 174 aaKnown RBP14.81□□□□□ -0.04
LINC00339-206ENST00000634451 UBIAD1Q9Y5Z9 338 aa14.81□□□□□ -0.04
LINC00339-206ENST00000634451 SGSM2O43147 1006 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 INSRRP14616 1297 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 MRPS6P82932 125 aaKnown RBP14.8□□□□□ -0.04
LINC00339-206ENST00000634451 NHLH1Q02575 133 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 SMAD2Q15796 467 aaKnown RBP14.8□□□□□ -0.04
LINC00339-206ENST00000634451 CSPP1Q1MSJ5 1256 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 TMEM266Q2M3C6 531 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 PUS10Q3MIT2 529 aaKnown RBP14.8□□□□□ -0.04
LINC00339-206ENST00000634451 TYW1BQ6NUM6 668 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 TAF2Q6P1X5 1199 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 NLRX1Q86UT6 975 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 GLG1Q92896 1179 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 CUL5Q93034 780 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 GPRASP2Q96D09 838 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 TMX1Q9H3N1 280 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 CLEC1BQ9P126 229 aa14.8□□□□□ -0.04
LINC00339-206ENST00000634451 SH2B2O14492 632 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-206ENST00000634451 PRC1O43663 620 aa14.79□□□□□ -0.04
LINC00339-206ENST00000634451 GLP2RO95838 553 aa14.79□□□□□ -0.04
LINC00339-206ENST00000634451 MMP1P03956 469 aa14.79□□□□□ -0.04
LINC00339-206ENST00000634451 MRE11P49959 708 aa14.79□□□□□ -0.04
LINC00339-206ENST00000634451 TSHZ1Q6ZSZ6 1077 aa14.79□□□□□ -0.04
LINC00339-206ENST00000634451 RBM23Q86U06 439 aaKnown RBP14.79□□□□□ -0.04
LINC00339-206ENST00000634451 RNF135Q8IUD6 432 aa14.79□□□□□ -0.04
LINC00339-206ENST00000634451 KLHL23Q8NBE8 558 aa14.79□□□□□ -0.04
LINC00339-206ENST00000634451 CTCFLQ8NI51 663 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-206ENST00000634451 SEPT1Q8WYJ6 367 aa14.79□□□□□ -0.04
LINC00339-206ENST00000634451 PSTPIP2Q9H939 334 aa14.79□□□□□ -0.04
LINC00339-206ENST00000634451 BARX2Q9UMQ3 279 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-206ENST00000634451 MGEA5O60502 916 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 DDAH1O94760 285 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 RB1P06400 928 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 ARP10275 920 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 IRX6P78412 446 aaPredicted RBP14.78□□□□□ -0.04
LINC00339-206ENST00000634451 TRAF1Q13077 416 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 ADAM15Q13444 863 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 SMAD4Q13485 552 aaKnown RBP14.78□□□□□ -0.04
LINC00339-206ENST00000634451 MTMR1Q13613 665 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 SART3Q15020 963 aaKnown RBP14.78□□□□□ -0.04
LINC00339-206ENST00000634451 PLCB4Q15147 1175 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 SPPL3Q8TCT6 385 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 MAP4K1Q92918 833 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 MSLNLQ96KJ4 702 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 PPP1R16BQ96T49 567 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 CDHR5Q9HBB8 845 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 JADE2Q9NQC1 790 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 ERAP1Q9NZ08 941 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 PRKAG3Q9UGI9 489 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 SEC63Q9UGP8 760 aaKnown RBP14.78□□□□□ -0.04
LINC00339-206ENST00000634451 CD207Q9UJ71 328 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 PCDHA6Q9UN73 950 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 PCDHA8Q9Y5H6 950 aa14.78□□□□□ -0.04
LINC00339-206ENST00000634451 EVPLQ92817 2033 aa14.77□□□□□ -0.04
LINC00339-206ENST00000634451 ADAMTS3O15072 1205 aa14.77□□□□□ -0.05
LINC00339-206ENST00000634451 PPFIA3O75145 1194 aa14.77□□□□□ -0.05
LINC00339-206ENST00000634451 NRIP1P48552 1158 aa14.77□□□□□ -0.05
LINC00339-206ENST00000634451 ITGB3BPQ13352 177 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-206ENST00000634451 AAMPQ13685 434 aa14.77□□□□□ -0.05
LINC00339-206ENST00000634451 IER5LQ5T953 404 aa14.77□□□□□ -0.05
LINC00339-206ENST00000634451 XRRA1Q6P2D8 792 aa14.77□□□□□ -0.05
LINC00339-206ENST00000634451 NFXL1Q6ZNB6 911 aa14.77□□□□□ -0.05
LINC00339-206ENST00000634451 VN1R2Q8NFZ6 395 aa14.77□□□□□ -0.05
LINC00339-206ENST00000634451 LMAN2LQ9H0V9 348 aa14.77□□□□□ -0.05
LINC00339-206ENST00000634451 PADI3Q9ULW8 664 aa14.77□□□□□ -0.05
LINC00339-206ENST00000634451 FNDC1Q4ZHG4 1894 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-206ENST00000634451 STXBP3O00186 592 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms