RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 CEP63Q96MT8 703 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 ZNF287Q9HBT7 754 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 NOC2LQ9Y3T9 749 aaKnown RBP20.51■□□□□ 0.87
MECP2-218ENST00000629277 CCDC88AQ3V6T2 1871 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 ROBO1Q9Y6N7 1651 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 NR2F2P24468 414 aa20.5■□□□□ 0.87
MECP2-218ENST00000629277 DPY19L2P1Q6NXN4 242 aa20.5■□□□□ 0.87
MECP2-218ENST00000629277 GJB7Q6PEY0 223 aa20.5■□□□□ 0.87
MECP2-218ENST00000629277 SPAG5Q96R06 1193 aa20.5■□□□□ 0.87
MECP2-218ENST00000629277 ATXN2Q99700 1313 aaKnown RBP20.5■□□□□ 0.87
MECP2-218ENST00000629277 UCHL3P15374 230 aa20.5■□□□□ 0.87
MECP2-218ENST00000629277 LRRC27Q9C0I9 530 aa20.5■□□□□ 0.87
MECP2-218ENST00000629277 NAGPAQ9UK23 515 aa20.5■□□□□ 0.87
MECP2-218ENST00000629277 HDAC9Q9UKV0 1011 aa20.5■□□□□ 0.87
MECP2-218ENST00000629277 ODF2Q5BJF6 829 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 ARSHQ5FYA8 562 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 JMJD4Q9H9V9 463 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 BMP2KQ9NSY1 1161 aaPredicted RBP20.49■□□□□ 0.87
MECP2-218ENST00000629277 GEMIN8Q9NWZ8 242 aaKnown RBP20.49■□□□□ 0.87
MECP2-218ENST00000629277 DDX20Q9UHI6 824 aaKnown RBP20.49■□□□□ 0.87
MECP2-218ENST00000629277 SLC12A6Q9UHW9 1150 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 SPATA31A1Q5TZJ5 1347 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 KRIT1O00522 736 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 SLURP2P0DP57 97 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 CYP11B2P19099 503 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 IBSPP21815 317 aaPredicted RBP20.49■□□□□ 0.87
MECP2-218ENST00000629277 PICALMQ13492 652 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 DCAF17Q5H9S7 520 aaPredicted RBP20.49■□□□□ 0.87
MECP2-218ENST00000629277 ALKBH5Q6P6C2 394 aaKnown RBP20.49■□□□□ 0.87
MECP2-218ENST00000629277 MICALCLQ6ZW33 695 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 ADGRF4Q8IZF3 695 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 PAGR1Q9BTK6 254 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 TRIM31Q9BZY9 425 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 DDX60LQ5H9U9 1706 aaKnown RBP20.49■□□□□ 0.87
MECP2-218ENST00000629277 MAST2Q6P0Q8 1798 aa20.49■□□□□ 0.87
MECP2-218ENST00000629277 POTEFA5A3E0 1075 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 TTI1O43156 1089 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 POTEIP0CG38 1075 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 ZBTB48P10074 688 aaPredicted RBP20.48■□□□□ 0.87
MECP2-218ENST00000629277 AKR1B1P15121 316 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 ACTN3Q08043 901 aaPredicted RBP20.48■□□□□ 0.87
MECP2-218ENST00000629277 SF3A3Q12874 501 aaKnown RBP eCLIP20.48■□□□□ 0.87
MECP2-218ENST00000629277 POTEGQ6S5H5 508 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 POTEEQ6S8J3 1075 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 C6orf89Q6UWU4 347 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 ARHGAP27Q6ZUM4 889 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 CCDC65Q8IXS2 484 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 NYXQ9GZU5 481 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 DPH5Q9H2P9 285 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 VCPKMTQ9H867 229 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 MTMR4Q9NYA4 1195 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 NOVA2Q9UNW9 492 aaKnown RBP20.48■□□□□ 0.87
MECP2-218ENST00000629277 USP17L15C9J2P7 530 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 USP17L13C9JLJ4 530 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 USP17L11C9JVI0 530 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 USP17L18D6R9N7 530 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 USP17L22D6RA61 530 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 USP17L17D6RBQ6 530 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 USP17L19D6RCP7 530 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 USP17L20D6RJB6 530 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 MEIS1O00470 390 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 KRT18P05783 430 aaKnown RBP20.48■□□□□ 0.87
MECP2-218ENST00000629277 CHRM1P11229 460 aaPredicted RBP20.48■□□□□ 0.87
MECP2-218ENST00000629277 MARSP56192 900 aaKnown RBP20.48■□□□□ 0.87
MECP2-218ENST00000629277 USP17L24Q0WX57 530 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 PPP4R3AQ6IN85 833 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 USP17L6PQ6QN14 398 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 TPTE2Q6XPS3 522 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 YTHDF3Q7Z739 585 aaKnown RBP20.48■□□□□ 0.87
MECP2-218ENST00000629277 SPATS2Q86XZ4 545 aaKnown RBP20.48■□□□□ 0.87
MECP2-218ENST00000629277 NR2E1Q9Y466 385 aa20.48■□□□□ 0.87
MECP2-218ENST00000629277 ATP2C2O75185 946 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 MED24O75448 989 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 GNA14O95837 355 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 RHBDL3P58872 404 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 PSMC6P62333 389 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 ADAT2Q7Z6V5 191 aaKnown RBP20.47■□□□□ 0.87
MECP2-218ENST00000629277 TPCN2Q8NHX9 752 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 ACTRT1Q8TDG2 376 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 MYCBPQ99417 103 aaPredicted RBP20.47■□□□□ 0.87
MECP2-218ENST00000629277 GMNCA6NCL1 334 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 PGRMC1O00264 195 aaKnown RBP20.47■□□□□ 0.87
MECP2-218ENST00000629277 PON1P27169 355 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 SMARCA1P28370 1054 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 COPB2P35606 906 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 NT5C2P49902 561 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.47■□□□□ 0.871e-7■■□□□ 11.9
MECP2-218ENST00000629277 OSBPL7Q9BZF2 842 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 IKZF4Q9H2S9 585 aa20.47■□□□□ 0.87
MECP2-218ENST00000629277 GPR75-ASB3A0A0A6YYF3 556 aa20.46■□□□□ 0.87
MECP2-218ENST00000629277 CETN3O15182 167 aa20.46■□□□□ 0.87
MECP2-218ENST00000629277 LDHCP07864 332 aa20.46■□□□□ 0.87
MECP2-218ENST00000629277 RFC4P35249 363 aa20.46■□□□□ 0.87
MECP2-218ENST00000629277 MAGOHP61326 146 aaKnown RBP20.46■□□□□ 0.87
MECP2-218ENST00000629277 CUL1Q13616 776 aa20.46■□□□□ 0.87
MECP2-218ENST00000629277 LRIG3Q6UXM1 1119 aa20.46■□□□□ 0.87
MECP2-218ENST00000629277 DPP8Q6V1X1 898 aaPredicted RBP20.46■□□□□ 0.87
MECP2-218ENST00000629277 KCTD1Q719H9 257 aa20.46■□□□□ 0.87
MECP2-218ENST00000629277 PEX26Q7Z412 305 aa20.46■□□□□ 0.87
MECP2-218ENST00000629277 CCDC91Q7Z6B0 441 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms