RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 RUFY4Q6ZNE9 571 aa23.36■■□□□ 1.33
SMC6-210ENST00000621152 REXO1Q8N1G1 1221 aaKnown RBP23.36■■□□□ 1.33
SMC6-210ENST00000621152 UIMC1Q96RL1 719 aa23.36■■□□□ 1.33
SMC6-210ENST00000621152 COL25A1Q9BXS0 654 aaPredicted RBP23.36■■□□□ 1.33
SMC6-210ENST00000621152 UPF3BQ9BZI7 483 aaKnown RBP23.36■■□□□ 1.33
SMC6-210ENST00000621152 PRDM6Q9NQX0 595 aa23.36■■□□□ 1.33
SMC6-210ENST00000621152 LCHNA4D1U4 455 aa23.35■■□□□ 1.33
SMC6-210ENST00000621152 RRN3P2A6NIE6 340 aa23.35■■□□□ 1.33
SMC6-210ENST00000621152 DDX39AO00148 427 aaKnown RBP23.35■■□□□ 1.33
SMC6-210ENST00000621152 CHRNA1P02708 482 aa23.35■■□□□ 1.33
SMC6-210ENST00000621152 AMHP03971 560 aa23.35■■□□□ 1.33
SMC6-210ENST00000621152 MARCH8Q5T0T0 291 aa23.35■■□□□ 1.33
SMC6-210ENST00000621152 PLPPR4Q7Z2D5 763 aa23.35■■□□□ 1.33
SMC6-210ENST00000621152 RSPH3Q86UC2 560 aa23.35■■□□□ 1.33
SMC6-210ENST00000621152 TNPO1Q92973 898 aaKnown RBP23.35■■□□□ 1.33
SMC6-210ENST00000621152 ZNF274Q96GC6 653 aaPredicted RBP23.35■■□□□ 1.33
SMC6-210ENST00000621152 TUBE1Q9UJT0 475 aa23.35■■□□□ 1.33
SMC6-210ENST00000621152 ATG7O95352 703 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 SSRP1Q08945 709 aaKnown RBP23.34■■□□□ 1.33
SMC6-210ENST00000621152 RPAINQ86UA6 219 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 MYOCDQ8IZQ8 938 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 MICALL1Q8N3F8 863 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 BICD2Q8TD16 824 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 RASGRP4Q8TDF6 673 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 DNAJB3Q8WWF6 145 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 CRYGNQ8WXF5 182 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 PDRG1Q9NUG6 133 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 VPS54Q9P1Q0 977 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 TRPC6Q9Y210 931 aa23.34■■□□□ 1.33
SMC6-210ENST00000621152 MBLAC1A4D2B0 266 aaPredicted RBP23.33■■□□□ 1.33
SMC6-210ENST00000621152 EPOPA6NHQ4 379 aa23.33■■□□□ 1.33
SMC6-210ENST00000621152 CCNE2O96020 404 aa23.33■■□□□ 1.33
SMC6-210ENST00000621152 PLCB4Q15147 1175 aa23.33■■□□□ 1.33
SMC6-210ENST00000621152 TRIM22Q8IYM9 498 aa23.33■■□□□ 1.33
SMC6-210ENST00000621152 CCDC148Q8NFR7 591 aa23.33■■□□□ 1.33
SMC6-210ENST00000621152 IGLV3-22A0A075B6J6 115 aa23.32■■□□□ 1.32
SMC6-210ENST00000621152 IPO5O00410 1097 aaKnown RBP23.32■■□□□ 1.32
SMC6-210ENST00000621152 CPLX1O14810 134 aa23.32■■□□□ 1.32
SMC6-210ENST00000621152 DHX15O43143 795 aaKnown RBP23.32■■□□□ 1.32
SMC6-210ENST00000621152 GTPBP6O43824 516 aaPredicted RBP23.32■■□□□ 1.32
SMC6-210ENST00000621152 NLRP5P59047 1200 aa23.32■■□□□ 1.32
SMC6-210ENST00000621152 STK3Q13188 491 aa23.32■■□□□ 1.32
SMC6-210ENST00000621152 ABHD15Q6UXT9 468 aa23.32■■□□□ 1.32
SMC6-210ENST00000621152 SPRED2Q7Z698 418 aa23.32■■□□□ 1.32
SMC6-210ENST00000621152 ZBTB10Q96DT7 871 aa23.32■■□□□ 1.32
SMC6-210ENST00000621152 ZNF577Q9BSK1 485 aa23.32■■□□□ 1.32
SMC6-210ENST00000621152 INSL6Q9Y581 213 aa23.32■■□□□ 1.32
SMC6-210ENST00000621152 MYO9BQ13459 2157 aa23.32■■□□□ 1.32
SMC6-210ENST00000621152 POTEB3A0JP26 581 aa23.31■■□□□ 1.32
SMC6-210ENST00000621152 BACH1O14867 736 aa23.31■■□□□ 1.32
SMC6-210ENST00000621152 MKRN4PQ13434 485 aaPredicted RBP23.31■■□□□ 1.32
SMC6-210ENST00000621152 POTEBQ6S5H4 581 aa23.31■■□□□ 1.32
SMC6-210ENST00000621152 TRAPPC12Q8WVT3 735 aa23.31■■□□□ 1.32
SMC6-210ENST00000621152 APBB2Q92870 758 aa23.31■■□□□ 1.32
SMC6-210ENST00000621152 IFIH1Q9BYX4 1025 aaKnown RBP23.31■■□□□ 1.32
SMC6-210ENST00000621152 FAM49AQ9H0Q0 323 aaPredicted RBP23.31■■□□□ 1.32
SMC6-210ENST00000621152 SH3GLB2Q9NR46 395 aa23.31■■□□□ 1.32
SMC6-210ENST00000621152 MTCH2Q9Y6C9 303 aa23.31■■□□□ 1.32
SMC6-210ENST00000621152 IGKV6D-21A0A0A0MT36 114 aa23.3■■□□□ 1.32
SMC6-210ENST00000621152 UPP2O95045 317 aa23.3■■□□□ 1.32
SMC6-210ENST00000621152 GHRP10912 638 aa23.3■■□□□ 1.32
SMC6-210ENST00000621152 POU3F3P20264 500 aaPredicted RBP23.3■■□□□ 1.32
SMC6-210ENST00000621152 PRR16Q569H4 304 aa23.3■■□□□ 1.32
SMC6-210ENST00000621152 FAM160B1Q5W0V3 765 aa23.3■■□□□ 1.32
SMC6-210ENST00000621152 SWSAP1Q6NVH7 229 aa23.3■■□□□ 1.32
SMC6-210ENST00000621152 TBC1D22BQ9NU19 505 aa23.3■■□□□ 1.32
SMC6-210ENST00000621152 CDH23Q9H251 3354 aa23.3■■□□□ 1.32
SMC6-210ENST00000621152 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.29■■□□□ 1.32
SMC6-210ENST00000621152 CIITAP33076 1130 aa23.29■■□□□ 1.32
SMC6-210ENST00000621152 SLC26A2P50443 739 aa23.29■■□□□ 1.32
SMC6-210ENST00000621152 MGAT3Q09327 533 aa23.29■■□□□ 1.32
SMC6-210ENST00000621152 KRT40Q6A162 431 aa23.29■■□□□ 1.32
SMC6-210ENST00000621152 MIS18BP1Q6P0N0 1132 aa23.29■■□□□ 1.32
SMC6-210ENST00000621152 CPLX2Q6PUV4 134 aaKnown RBP23.29■■□□□ 1.32
SMC6-210ENST00000621152 TOP1MTQ969P6 601 aa23.29■■□□□ 1.32
SMC6-210ENST00000621152 ZNF302Q9NR11 478 aa23.29■■□□□ 1.32
SMC6-210ENST00000621152 MTUS1Q9ULD2 1270 aa23.29■■□□□ 1.32
SMC6-210ENST00000621152 PCDHA2Q9Y5H9 948 aa23.29■■□□□ 1.32
SMC6-210ENST00000621152 CDY2AQ9Y6F7 541 aa23.29■■□□□ 1.32
SMC6-210ENST00000621152 KAT6AQ92794 2004 aa23.28■■□□□ 1.32
SMC6-210ENST00000621152 LINC01553A4QN01 128 aa23.28■■□□□ 1.32
SMC6-210ENST00000621152 DEXIO95424 95 aa23.28■■□□□ 1.32
SMC6-210ENST00000621152 ERVK-21P61565 698 aa23.28■■□□□ 1.32
SMC6-210ENST00000621152 MRPS6P82932 125 aaKnown RBP23.28■■□□□ 1.32
SMC6-210ENST00000621152 SETQ01105 290 aaPredicted RBP23.28■■□□□ 1.32
SMC6-210ENST00000621152 GRB10Q13322 594 aa23.28■■□□□ 1.32
SMC6-210ENST00000621152 LPIN1Q14693 890 aa23.28■■□□□ 1.32
SMC6-210ENST00000621152 IER5Q5VY09 327 aa23.28■■□□□ 1.32
SMC6-210ENST00000621152 PDXDC2PQ6P474 469 aa23.28■■□□□ 1.32
SMC6-210ENST00000621152 TGS1Q96RS0 853 aaKnown RBP23.28■■□□□ 1.32
SMC6-210ENST00000621152 TSPYL2Q9H2G4 693 aaPredicted RBP23.28■■□□□ 1.32
SMC6-210ENST00000621152 CHD9Q3L8U1 2897 aa23.27■■□□□ 1.32
SMC6-210ENST00000621152 EDIL3O43854 480 aa23.27■■□□□ 1.32
SMC6-210ENST00000621152 HBP1O60381 514 aa23.27■■□□□ 1.32
SMC6-210ENST00000621152 RPLP2P05387 115 aaKnown RBP23.27■■□□□ 1.32
SMC6-210ENST00000621152 USP11P51784 963 aa23.27■■□□□ 1.32
SMC6-210ENST00000621152 HTRA4P83105 476 aaPredicted RBP23.27■■□□□ 1.32
SMC6-210ENST00000621152 TMEM62Q0P6H9 643 aa23.27■■□□□ 1.32
SMC6-210ENST00000621152 SKIV2LQ15477 1246 aaKnown RBP23.27■■□□□ 1.32
SMC6-210ENST00000621152 FBXO47Q5MNV8 452 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms