RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 HESX1Q9UBX0 185 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 ZNF394Q53GI3 561 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 CYFIP1Q7L576 1253 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 EIF2AK1Q9BQI3 630 aaKnown RBP13.38□□□□□ -0.27
GTF2I-218ENST00000620879 THAP9Q9H5L6 903 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 TBC1D22BQ9NU19 505 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 GUCY2FP51841 1108 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 SF3A3Q12874 501 aaKnown RBP eCLIP13.37□□□□□ -0.27
GTF2I-218ENST00000620879 ZNF280CQ8ND82 737 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 ANAPC4Q9UJX5 808 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 HYOU1Q9Y4L1 999 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 KRIT1O00522 736 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 CSPG5O95196 566 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 GCLMP48507 274 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 USP11P51784 963 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 CCDC144BQ3MJ40 725 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 BSPRYQ5W0U4 402 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 SCARA5Q6ZMJ2 495 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 IFT20Q8IY31 132 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 MB21D1Q8N884 522 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 RSPH14Q9UHP6 348 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 NBPF11Q86T75 865 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 TRIM9Q9C026 710 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 HACL1Q9UJ83 578 aa13.37□□□□□ -0.27
GTF2I-218ENST00000620879 GOLGA8SH3BPF8 625 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 P4HBP07237 508 aaKnown RBP13.36□□□□□ -0.27
GTF2I-218ENST00000620879 MFAP3P55082 362 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 TUBB2AQ13885 445 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 FAM149B1Q96BN6 582 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 RPS6KC1Q96S38 1066 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 TUBB2BQ9BVA1 445 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 TEX13BQ9BXU2 312 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 DPH5Q9H2P9 285 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 NPHP3-ACAD11A0A0J9YXS1 232 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 MYO1FO00160 1098 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 FTCDO95954 541 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 KRT76Q01546 638 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 GRIK5Q16478 980 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 MED10Q9BTT4 135 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 REREQ9P2R6 1566 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 TCRBV5S4A2TA0A5A2 114 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 ZMYND10O75800 440 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 NDUFA10O95299 355 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 NR3C1P04150 777 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 CDC25BP30305 580 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 YWHAEP62258 255 aaKnown RBP13.36□□□□□ -0.27
GTF2I-218ENST00000620879 UHMK1Q8TAS1 419 aaKnown RBP13.36□□□□□ -0.27
GTF2I-218ENST00000620879 ATG4CQ96DT6 458 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 TSNARE1Q96NA8 513 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 PVALEFA0A1B0GWK0 134 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 DENND3A2RUS2 1198 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 CAPN9O14815 690 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 SLURP2P0DP57 97 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 FERP16591 822 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 KAZNQ674X7 775 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 MSTO1Q9BUK6 570 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 FAM169AQ9Y6X4 670 aa13.36□□□□□ -0.27
GTF2I-218ENST00000620879 TCP1P17987 556 aaKnown RBP13.35□□□□□ -0.27
GTF2I-218ENST00000620879 INPP5BP32019 993 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 VGLL2Q8N8G2 317 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 DPF2Q92785 391 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 ZNF653Q96CK0 615 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 PLCD4Q9BRC7 762 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 NHEJ1Q9H9Q4 299 aaPredicted RBP13.35□□□□□ -0.27
GTF2I-218ENST00000620879 TSKSQ9UJT2 592 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 ZNF233A6NK53 670 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 THAP12O43422 761 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 NMT1P30419 496 aaKnown RBP13.35□□□□□ -0.27
GTF2I-218ENST00000620879 JAK3P52333 1124 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 ZDHHC15Q96MV8 337 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.35□□□□□ -0.27
GTF2I-218ENST00000620879 IQCA1LA6NCM1 817 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 KCNH2Q12809 1159 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 STK4Q13043 487 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 KCNB2Q92953 911 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 CCSER1Q9C0I3 900 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 ZMYND12Q9H0C1 365 aa13.35□□□□□ -0.27
GTF2I-218ENST00000620879 PALM3A6NDB9 673 aaPredicted RBP13.34□□□□□ -0.27
GTF2I-218ENST00000620879 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
GTF2I-218ENST00000620879 TRIM49P0CI25 452 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 TRIM49CP0CI26 452 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 SNX16P57768 344 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 MCPH1Q8NEM0 835 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 MAD2L2Q9UI95 211 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 MFAP3LO75121 409 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 KIF11P52732 1056 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 SEC23AQ15436 765 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 CATSPER4Q7RTX7 472 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 LPAR1Q92633 364 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 UBR1Q8IWV7 1749 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 ADGRB2O60241 1585 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 LGALS16A8MUM7 142 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 GAS8O95995 478 aa13.34□□□□□ -0.27
GTF2I-218ENST00000620879 FMR1Q06787 632 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■□□□ 14.5
GTF2I-218ENST00000620879 ALKBH5Q6P6C2 394 aaKnown RBP13.34□□□□□ -0.27
GTF2I-218ENST00000620879 CAPN12Q6ZSI9 719 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms