RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 RASSF8Q8NHQ8 419 aa13.12□□□□□ -0.31
PDPN-211ENST00000617617 TIPINQ9BVW5 301 aa13.12□□□□□ -0.31
PDPN-211ENST00000617617 ABHD16BQ9H3Z7 469 aa13.12□□□□□ -0.31
PDPN-211ENST00000617617 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
PDPN-211ENST00000617617 LGR5O75473 907 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 RPN1P04843 607 aaKnown RBP13.11□□□□□ -0.31
PDPN-211ENST00000617617 SUPT20HL2P0C7V6 817 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 PPP1R2P41236 205 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 LACTBP83111 547 aaPredicted RBP13.11□□□□□ -0.31
PDPN-211ENST00000617617 PSMD2Q13200 908 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 CUL4BQ13620 913 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 FOXR2Q6PJQ5 311 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 UNC13DQ70J99 1090 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 DPP9Q86TI2 863 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 NPLOC4Q8TAT6 608 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 DNAJC19Q96DA6 116 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 MAFBQ9Y5Q3 323 aaPredicted RBP13.11□□□□□ -0.31
PDPN-211ENST00000617617 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 STBD1O95210 358 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 HOXD8P13378 290 aaPredicted RBP13.11□□□□□ -0.31
PDPN-211ENST00000617617 ACTR2P61160 394 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 WDR78Q5VTH9 848 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 MIS18BP1Q6P0N0 1132 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 FAM200AQ8TCP9 573 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
PDPN-211ENST00000617617 LXNQ9BS40 222 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
PDPN-211ENST00000617617 DACH1Q9UI36 760 aa13.11□□□□□ -0.31
PDPN-211ENST00000617617 GOLGA6L3A6NEY3 463 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 MYMKA6NI61 221 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 VEGFBP49765 207 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 MCM6Q14566 821 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 ZNF658Q5TYW1 1059 aaPredicted RBP13.1□□□□□ -0.31
PDPN-211ENST00000617617 IQSEC1Q6DN90 963 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 GRAMD1CQ8IYS0 662 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 ATP6V0A1Q93050 837 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 EMSYQ7Z589 1322 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 CYP11B2P19099 503 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 BMP6P22004 513 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 CTGFP29279 349 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 AFMP43652 599 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 MRE11P49959 708 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 SEPT14Q6ZU15 432 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 RNF186Q9NXI6 227 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 RGL1Q9NZL6 768 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 WRAP73Q9P2S5 460 aaPredicted RBP13.1□□□□□ -0.31
PDPN-211ENST00000617617 Q9Y3F1 56 aa13.1□□□□□ -0.31
PDPN-211ENST00000617617 GUCY2CP25092 1073 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 ERCC5P28715 1186 aaPredicted RBP13.09□□□□□ -0.31
PDPN-211ENST00000617617 NKX3-2P78367 333 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 KCNN1Q92952 543 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 RBSNQ9H1K0 784 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 E9PMD0 336 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 IKBKBO14920 756 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 ARIH2O95376 493 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 LAMC2Q13753 1193 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 IQCB1Q15051 598 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 ANO6Q4KMQ2 910 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 C1orf186Q6ZWK4 172 aa13.09□□□□□ -0.31
PDPN-211ENST00000617617 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
PDPN-211ENST00000617617 GSTTP1A0A1W2PQM5 241 aa13.08□□□□□ -0.31
PDPN-211ENST00000617617 SLC26A2P50443 739 aa13.08□□□□□ -0.31
PDPN-211ENST00000617617 PSMC6P62333 389 aa13.08□□□□□ -0.31
PDPN-211ENST00000617617 CTTNQ14247 550 aaKnown RBP13.08□□□□□ -0.31
PDPN-211ENST00000617617 L1TD1Q5T7N2 865 aaKnown RBP13.08□□□□□ -0.31
PDPN-211ENST00000617617 PAXIP1Q6ZW49 1069 aaPredicted RBP13.08□□□□□ -0.31
PDPN-211ENST00000617617 PLPPR4Q7Z2D5 763 aa13.08□□□□□ -0.31
PDPN-211ENST00000617617 FBXO16Q8IX29 292 aaPredicted RBP13.08□□□□□ -0.31
PDPN-211ENST00000617617 GPR20Q99678 358 aa13.08□□□□□ -0.31
PDPN-211ENST00000617617 NIFKQ9BYG3 293 aaKnown RBP13.08□□□□□ -0.31
PDPN-211ENST00000617617 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.31
PDPN-211ENST00000617617 ODF2LQ9ULJ1 636 aa13.08□□□□□ -0.31
PDPN-211ENST00000617617 TNPO2O14787 897 aaKnown RBP13.08□□□□□ -0.32
PDPN-211ENST00000617617 CHMP2AO43633 222 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 ZNF131P52739 623 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 ARHGAP1Q07960 439 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 ACVR2BQ13705 512 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 ZRSR1Q15695 479 aaKnown RBP13.08□□□□□ -0.32
PDPN-211ENST00000617617 KMT5BQ4FZB7 885 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 DUSP28Q4G0W2 176 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 TPH2Q8IWU9 490 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 SEPT1Q8WYJ6 367 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 DDX12PQ92771 950 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 SP3Q02447 781 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 DPCR1Q3MIW9 517 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 RINT1Q6NUQ1 792 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 CYFIP1Q7L576 1253 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 PPTC7Q8NI37 304 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 TRIM47Q96LD4 638 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 PLIN2Q99541 437 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
PDPN-211ENST00000617617 DDX39AO00148 427 aaKnown RBP13.07□□□□□ -0.32
PDPN-211ENST00000617617 GGPS1O95749 300 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 GH1P01241 217 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 ZNF865P0CJ78 1059 aaPredicted RBP13.07□□□□□ -0.32
PDPN-211ENST00000617617 GAP43P17677 238 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 GIT2Q14161 759 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms