RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 RNF26Q9BY78 433 aaPredicted RBP11.02□□□□□ -0.65
TARDBP-218ENST00000617172 IFIH1Q9BYX4 1025 aaKnown RBP11.02□□□□□ -0.65
TARDBP-218ENST00000617172 TM6SF1Q9BZW5 370 aa11.02□□□□□ -0.65
TARDBP-218ENST00000617172 CERS4Q9HA82 394 aa11.02□□□□□ -0.65
TARDBP-218ENST00000617172 ZSWIM6Q9HCJ5 1215 aa11.02□□□□□ -0.65
TARDBP-218ENST00000617172 AGO4Q9HCK5 861 aaKnown RBP11.02□□□□□ -0.65
TARDBP-218ENST00000617172 CYP46A1Q9Y6A2 500 aa11.02□□□□□ -0.65
TARDBP-218ENST00000617172 MTCH2Q9Y6C9 303 aa11.02□□□□□ -0.65
TARDBP-218ENST00000617172 SQORQ9Y6N5 450 aa11.02□□□□□ -0.65
TARDBP-218ENST00000617172 VCANP13611 3396 aa11.02□□□□□ -0.65
TARDBP-218ENST00000617172 CHD7Q9P2D1 2997 aa11.02□□□□□ -0.65
TARDBP-218ENST00000617172 NID2Q14112 1375 aa11.02□□□□□ -0.65
TARDBP-218ENST00000617172 MYH7BA7E2Y1 1941 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 RFXAPO00287 272 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 CHRNA1P02708 482 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 INSRRP14616 1297 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 IFNAR1P17181 557 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 MARK3P27448 753 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 PDIA3P30101 505 aaKnown RBP11.01□□□□□ -0.65
TARDBP-218ENST00000617172 HTRA4P83105 476 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-218ENST00000617172 SETQ01105 290 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-218ENST00000617172 NTRK3Q16288 839 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 PKN1Q16512 942 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 TCTN1Q2MV58 587 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 MARCH8Q5T0T0 291 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 IER5Q5VY09 327 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 JAKMIP3Q5VZ66 844 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 ERICH6BQ5W0A0 696 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 FAM160B1Q5W0V3 765 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.01□□□□□ -0.658e-12■■■■■ 35.2
TARDBP-218ENST00000617172 PLA2G4DQ86XP0 818 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 TRIM22Q8IYM9 498 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 MICALL1Q8N3F8 863 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 NME8Q8N427 588 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 IL27Q8NEV9 243 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 CRYGNQ8WXF5 182 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 PGBD1Q96JS3 809 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 SAMD11Q96NU1 681 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 PCYT2Q99447 389 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 SH3GLB2Q9NR46 395 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 TBC1D22BQ9NU19 505 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 TMEM260Q9NX78 707 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
TARDBP-218ENST00000617172 TRIP12Q14669 1992 aaPredicted RBP11□□□□□ -0.65
TARDBP-218ENST00000617172 IGKV6D-21A0A0A0MT36 114 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 POTEB3A0JP26 581 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 LCHNA4D1U4 455 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 LINC01553A4QN01 128 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 M0QZ92 97 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 IPO5O00410 1097 aaKnown RBP11□□□□□ -0.65
TARDBP-218ENST00000617172 HBP1O60381 514 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 ARHGEF15O94989 841 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 GRB10Q13322 594 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 ITGB3BPQ13352 177 aaPredicted RBP11□□□□□ -0.65
TARDBP-218ENST00000617172 SKIV2LQ15477 1246 aaKnown RBP11□□□□□ -0.65
TARDBP-218ENST00000617172 MIS18BP1Q6P0N0 1132 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 FAM117BQ6P1L5 589 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 CPLX2Q6PUV4 134 aaKnown RBP11□□□□□ -0.65
TARDBP-218ENST00000617172 POTEBQ6S5H4 581 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 RUFY4Q6ZNE9 571 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 TMCO2Q7Z6W1 182 aaPredicted RBP11□□□□□ -0.65
TARDBP-218ENST00000617172 FAM177A1Q8N128 213 aaPredicted RBP11□□□□□ -0.65
TARDBP-218ENST00000617172 DNAJB3Q8WWF6 145 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 ZNF274Q96GC6 653 aaPredicted RBP11□□□□□ -0.65
TARDBP-218ENST00000617172 YME1L1Q96TA2 773 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 ZNF577Q9BSK1 485 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 TCEAL9Q9UHQ7 104 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 COG5Q9UP83 839 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 PCDHA2Q9Y5H9 948 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 SCN5AQ14524 2016 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 TET1Q8NFU7 2136 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 TANC1Q9C0D5 1861 aa11□□□□□ -0.65
TARDBP-218ENST00000617172 CUL9Q8IWT3 2517 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 IGLV3-22A0A075B6J6 115 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 SMIM35A0A1B0GVV1 85 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 EPOPA6NHQ4 379 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 FAM86B1E9PN63 330 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 CPLX1O14810 134 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 BACH1O14867 736 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 LPXNO60711 386 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 EIF5BO60841 1220 aaKnown RBP10.99□□□□□ -0.65
TARDBP-218ENST00000617172 FAM86B2P0C5J1 330 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 CIITAP33076 1130 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 USP11P51784 963 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 IGBP1P78318 339 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 MRPS6P82932 125 aaKnown RBP10.99□□□□□ -0.65
TARDBP-218ENST00000617172 SSRP1Q08945 709 aaKnown RBP10.99□□□□□ -0.65
TARDBP-218ENST00000617172 MGAT3Q09327 533 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 PLCB4Q15147 1175 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 ZNF746Q6NUN9 644 aaPredicted RBP10.99□□□□□ -0.65
TARDBP-218ENST00000617172 ABHD15Q6UXT9 468 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 SMAP1Q8IYB5 467 aaPredicted RBP10.99□□□□□ -0.65
TARDBP-218ENST00000617172 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
TARDBP-218ENST00000617172 PHKBQ93100 1093 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 SLC26A6Q9BXS9 759 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 FTHL17Q9BXU8 183 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 SUGCTQ9HAC7 445 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 PRDM6Q9NQX0 595 aa10.99□□□□□ -0.65
TARDBP-218ENST00000617172 MYO9BQ13459 2157 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms