RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 PSD3Q9NYI0 1048 aa9.49□□□□□ -0.89
PDE6A-204ENST00000613228 TUBE1Q9UJT0 475 aa9.49□□□□□ -0.89
PDE6A-204ENST00000613228 SAR1BQ9Y6B6 198 aa9.49□□□□□ -0.89
PDE6A-204ENST00000613228 CCDC160A6NGH7 325 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 F5H6K3 240 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 TRIM66O15016 1216 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 MUTP22033 750 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 RFX1P22670 979 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 KLRC3Q07444 240 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 CRYMQ14894 314 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 QRICH1Q2TAL8 776 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 C8orf74Q6P047 294 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 ZNF710Q8N1W2 664 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 PRPF38AQ8NAV1 312 aaKnown RBP9.48□□□□□ -0.89
PDE6A-204ENST00000613228 FAM207AQ9NSI2 230 aaPredicted RBP9.48□□□□□ -0.89
PDE6A-204ENST00000613228 ZNF70Q9UC06 446 aaPredicted RBP9.48□□□□□ -0.89
PDE6A-204ENST00000613228 LRP6O75581 1613 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 SPEF2Q9C093 1822 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 A0A1W2PQC6 194 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 ATP2A2P16615 1042 aaKnown RBP9.48□□□□□ -0.89
PDE6A-204ENST00000613228 NR2F2P24468 414 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 PSMD7P51665 324 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 RBL2Q08999 1139 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 CHAMP1Q96JM3 812 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 C7orf25Q9BPX7 421 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 RTFDC1Q9BY42 306 aaPredicted RBP9.48□□□□□ -0.89
PDE6A-204ENST00000613228 EDEM3Q9BZQ6 932 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 KIAA1586Q9HCI6 787 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 C1orf112Q9NSG2 853 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 UTP11Q9Y3A2 253 aaKnown RBP9.48□□□□□ -0.89
PDE6A-204ENST00000613228 POLRMTO00411 1230 aaKnown RBP9.48□□□□□ -0.89
PDE6A-204ENST00000613228 PDE6CP51160 858 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 ARHGAP4P98171 946 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 SLFN12LQ6IEE8 588 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 SUGP1Q8IWZ8 645 aaKnown RBP9.48□□□□□ -0.89
PDE6A-204ENST00000613228 FAM186BQ8IYM0 893 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 SPICE1Q8N0Z3 855 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 GMCL1P1Q8NEA9 526 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 TCP11Q8WWU5 503 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 GLG1Q92896 1179 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 FAM204AQ9H8W3 233 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 AMFRQ9UKV5 643 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.48□□□□□ -0.89
PDE6A-204ENST00000613228 VIRMAQ69YN4 1812 aaKnown RBP9.48□□□□□ -0.89
PDE6A-204ENST00000613228 SERPING1P05155 500 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 CALCOCO2Q13137 446 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 KCNV1Q6PIU1 500 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 SPC25Q9HBM1 224 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 MAD2L2Q9UI95 211 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 KCPQ6ZWJ8 1503 aa9.48□□□□□ -0.89
PDE6A-204ENST00000613228 LGALS16A8MUM7 142 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 SPOPO43791 374 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 FXR2P51116 673 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 CYP2J2P51589 502 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 EN1Q05925 392 aaPredicted RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 PAK2Q13177 524 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 NAALADL2Q58DX5 795 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 GUF1Q8N442 669 aaKnown RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 CAPZA3Q96KX2 299 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 PPP2R3BQ9Y5P8 575 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 DTNBO60941 627 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 DNAJC8O75937 253 aaPredicted RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 RPSAP08865 295 aaKnown RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 SRGNP10124 158 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 CASP14P31944 242 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 SNRPFP62306 86 aaKnown RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 MAP3K9P80192 1104 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 SLC44A5Q8NCS7 719 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 RBM46Q8TBY0 533 aaKnown RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 CTTNBP2NLQ9P2B4 639 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 ITIH6Q6UXX5 1313 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 TMEM110-MUSTN1A8MSY1 372 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 SLC16A3O15427 465 aaKnown RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 SEC23AQ15436 765 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 ADAM21Q9UKJ8 722 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 WDR64B1ANS9 1081 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 MFAP3LO75121 409 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 PRPF6O94906 941 aaKnown RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 LDHAP00338 332 aaKnown RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 PDHBP11177 359 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 CUL4BQ13620 913 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 EPHA7Q15375 998 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 RNF10Q8N5U6 811 aaKnown RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 MCPH1Q8NEM0 835 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 NSUN6Q8TEA1 469 aaKnown RBP9.47□□□□□ -0.89
PDE6A-204ENST00000613228 KMT5AQ9NQR1 393 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 DUOX1Q9NRD9 1551 aa9.47□□□□□ -0.89
PDE6A-204ENST00000613228 KIAA0391O15091 583 aaKnown RBP9.46□□□□□ -0.89
PDE6A-204ENST00000613228 ANXA13P27216 316 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 GYS2P54840 703 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 KRT31Q15323 416 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 EAPPQ56P03 285 aaPredicted RBP9.46□□□□□ -0.89
PDE6A-204ENST00000613228 RBM43Q6ZSC3 357 aaKnown RBP9.46□□□□□ -0.89
PDE6A-204ENST00000613228 PEX26Q7Z412 305 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 COL23A1Q86Y22 540 aaPredicted RBP9.46□□□□□ -0.89
PDE6A-204ENST00000613228 GRK7Q8WTQ7 553 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 SLC7A3Q8WY07 619 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 PAGR1Q9BTK6 254 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 RAB17Q9H0T7 212 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms