RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 C19orf44Q9H6X5 657 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 TMEM191CA6NGB0 347 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 TMEM191BP0C7N4 346 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 TNNI2P48788 182 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ARID5BQ14865 1188 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 MIS18BP1Q6P0N0 1132 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 RSBN1LQ6PCB5 846 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ANLNQ9NQW6 1124 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 RBM8AQ9Y5S9 174 aaKnown RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 PLCH2O75038 1416 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 MYH3P11055 1940 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 STAM2O75886 525 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 CALB2P22676 271 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 TSHZ3Q63HK5 1081 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 MTHFD1LQ6UB35 978 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 PPWD1Q96BP3 646 aaKnown RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 MTO1Q9Y2Z2 717 aaKnown RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 SESN1Q9Y6P5 492 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ORC4O43929 436 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ZC3H11AO75152 810 aaKnown RBP eCLIP5.32□□□□□ -1.563e-6■■■■□ 19.8
VPS13D-213ENST00000613099 NLRP1Q9C000 1473 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 RPL5P46777 297 aaKnown RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ART3Q13508 389 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 NT5C3AQ9H0P0 336 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 METTL14Q9HCE5 456 aaKnown RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 PDLIM1O00151 329 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 TYW1BQ6NUM6 668 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 CEP19Q96LK0 163 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 CCDC134Q9H6E4 229 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 TXNDC16Q9P2K2 825 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 DIS3Q9Y2L1 958 aaKnown RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 PCDHGA3Q9Y5H0 932 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 KDM5BQ9UGL1 1544 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 GLI2P10070 1586 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 TRPM1Q7Z4N2 1603 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ZFYVE16Q7Z3T8 1539 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ITGA7Q13683 1181 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 CNNM4Q6P4Q7 775 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 KIRREL3Q8IZU9 778 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 AGTP01019 485 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 HSPA1AP0DMV8 641 aaKnown RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 HSPA1BP0DMV9 641 aaKnown RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ALOX15P16050 662 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 MXI1P50539 228 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 MPP3Q13368 585 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 MORC3Q14149 939 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 CCDC144BQ3MJ40 725 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 DHX40Q8IX18 779 aaKnown RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 RSPH1Q8WYR4 309 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ORC6Q9Y5N6 252 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 SSH2Q76I76 1423 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ADCY8P40145 1251 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 C21orf59P57076 290 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 EHHADHQ08426 723 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 PI16Q6UXB8 463 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 GRK7Q8WTQ7 553 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 TTC7AQ9ULT0 858 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 PTPDC1A2A3K4 754 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 TAF4O00268 1085 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 CD151P48509 253 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 ARID5AQ03989 594 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 DNAL1Q4LDG9 190 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 NCOA7Q8NI08 942 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 FERMT2Q96AC1 680 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 CCDC124Q96CT7 223 aaKnown RBP5.32□□□□□ -1.56
VPS13D-213ENST00000613099 RPS6KC1Q96S38 1066 aa5.32□□□□□ -1.56
VPS13D-213ENST00000613099 IFIT3O14879 490 aaKnown RBP5.31□□□□□ -1.56
VPS13D-213ENST00000613099 PDE6AP16499 860 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 USP4Q13107 963 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 Q6ZUG5 572 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 STXBP4Q6ZWJ1 553 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 CTDP1Q9Y5B0 961 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-213ENST00000613099 PPLO60437 1756 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 POLR2DO15514 142 aaKnown RBP5.31□□□□□ -1.56
VPS13D-213ENST00000613099 TTC4O95801 387 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 ASIC1P78348 528 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 TBC1D10BQ4KMP7 808 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-213ENST00000613099 CHAMP1Q96JM3 812 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 DSEQ9UL01 958 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 ADGRG1Q9Y653 693 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 TMEM247A6NEH6 219 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 ACTN1P12814 892 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 MMGT1Q8N4V1 131 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 SLC17A8Q8NDX2 589 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 FAM96AQ9H5X1 160 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 SLC39A2Q9NP94 309 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 STOML2Q9UJZ1 356 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 SOWAHDA6NJG2 315 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 DDHD2O94830 711 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 NDUFA10O95299 355 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 EEF1GP26641 437 aaKnown RBP5.31□□□□□ -1.56
VPS13D-213ENST00000613099 HAUS3Q68CZ6 603 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 MRPL50Q8N5N7 158 aaKnown RBP5.31□□□□□ -1.56
VPS13D-213ENST00000613099 RHOBTB2Q9BYZ6 727 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 PARVGQ9HBI0 331 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 MOV10Q9HCE1 1003 aaKnown RBP5.31□□□□□ -1.56
VPS13D-213ENST00000613099 TBCCD1Q9NVR7 557 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 WDR91A4D1P6 747 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 ATP6V1C1P21283 382 aa5.31□□□□□ -1.56
VPS13D-213ENST00000613099 CDH3P22223 829 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms