RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 CTSHP09668 335 aa16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 WDR5P61964 334 aaKnown RBP16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 IGBP1P78318 339 aa16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 KRT76Q01546 638 aa16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 ITGB3BPQ13352 177 aaPredicted RBP16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 HIC1Q14526 733 aa16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 ZNF746Q6NUN9 644 aaPredicted RBP16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 CKAP2LQ8IYA6 745 aa16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 SMAP1Q8IYB5 467 aaPredicted RBP16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 BLIDQ8IZY5 108 aa16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 APBB2Q92870 758 aa16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 WNT8BQ93098 351 aa16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 TELO2Q9Y4R8 837 aa16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 SAMM50Q9Y512 469 aa16.34■□□□□ 0.21
PKNOX1-210ENST00000607049 IGLV3-22A0A075B6J6 115 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 POTEB3A0JP26 581 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 CIITAP33076 1130 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 ADAM17P78536 824 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 SCRN1Q12765 414 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 IER5Q5VY09 327 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 POTEBQ6S5H4 581 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 RPAINQ86UA6 219 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 RASGRP4Q8TDF6 673 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 CRYGNQ8WXF5 182 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 ZNF302Q9NR11 478 aa16.33■□□□□ 0.2
PKNOX1-210ENST00000607049 HBP1O60381 514 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 ATG7O95352 703 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 PSAPP07602 524 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 INSRRP14616 1297 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 NEK4P51957 841 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 AK2P54819 239 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 NONOQ15233 471 aaKnown RBP eCLIP16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 PDXDC2PQ6P474 469 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 TRAF7Q6Q0C0 670 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 KRT25Q7Z3Z0 450 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 DAGLBQ8NCG7 672 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 DBF4BQ8NFT6 615 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 TBCKQ8TEA7 893 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 PRDM12Q9H4Q4 367 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 BRMS1Q9HCU9 246 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 STK36Q9NRP7 1315 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 TPCN1Q9ULQ1 816 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 YBX2Q9Y2T7 364 aaKnown RBP16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 PCDHA10Q9Y5I2 948 aa16.32■□□□□ 0.2
PKNOX1-210ENST00000607049 TANC1Q9C0D5 1861 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 LAMA2P24043 3122 aaKnown RBP16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 CCDC194A0A1B0GVG4 234 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 MBLAC1A4D2B0 266 aaPredicted RBP16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 WDR64B1ANS9 1081 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 GAS7O60861 476 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 CA3P07451 260 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 IGFBP4P22692 258 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 GPNMBQ14956 572 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 PLCB4Q15147 1175 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 PLEKHG4Q58EX7 1191 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 FAM26DQ5JW98 314 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 SWSAP1Q6NVH7 229 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 ABHD15Q6UXT9 468 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 ATP8B4Q8TF62 1192 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 RIT2Q99578 217 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 RAD9AQ99638 391 aa16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 NAP1L4Q99733 375 aaKnown RBP16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 IFIH1Q9BYX4 1025 aaKnown RBP16.31■□□□□ 0.2
PKNOX1-210ENST00000607049 IGKV6D-21A0A0A0MT36 114 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 GTPBP6O43824 516 aaPredicted RBP16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 CCNE2O96020 404 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 TRIM29Q14134 588 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 MBTPS1Q14703 1052 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 ZNF484Q5JVG2 852 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 MYOCDQ8IZQ8 938 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 NME8Q8N427 588 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 USP38Q8NB14 1042 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 DNAJB3Q8WWF6 145 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 IL17RAQ96F46 866 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 FAM167AQ96KS9 214 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 PCYT2Q99447 389 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 TEKT3Q9BXF9 490 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 FAM49AQ9H0Q0 323 aaPredicted RBP16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 ORC3Q9UBD5 711 aaPredicted RBP16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 CEP131Q9UPN4 1083 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 INSL6Q9Y581 213 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 PCDHA2Q9Y5H9 948 aa16.3■□□□□ 0.2
PKNOX1-210ENST00000607049 COL1A2P08123 1366 aa16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 DHX15O43143 795 aaKnown RBP16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 GJB5O95377 273 aa16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 MYOGP15173 224 aa16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 SFNP31947 248 aa16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 JAK3P52333 1124 aa16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 MRPS6P82932 125 aaKnown RBP16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 LRCH2Q5VUJ6 765 aa16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 MOXD1Q6UVY6 613 aa16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 RUFY4Q6ZNE9 571 aa16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 FAM43BQ6ZT52 329 aaPredicted RBP16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 TSPYL2Q9H2G4 693 aaPredicted RBP16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 NRBP2Q9NSY0 501 aa16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 TRIP12Q14669 1992 aaPredicted RBP16.29■□□□□ 0.2
PKNOX1-210ENST00000607049 SCN5AQ14524 2016 aa16.28■□□□□ 0.2
PKNOX1-210ENST00000607049 SMIM35A0A1B0GVV1 85 aa16.28■□□□□ 0.2
PKNOX1-210ENST00000607049 MARCH6O60337 910 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms