RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SPDYE6P0CI01 402 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 KLHL30Q0D2K2 578 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 KCNH2Q12809 1159 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 STYK1Q6J9G0 422 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 GJB7Q6PEY0 223 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 GOLGA6L1Q8N7Z2 621 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 ERGIC2Q96RQ1 377 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 GOPCQ9HD26 462 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 ARMCX3Q9UH62 379 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 DLEC1Q9Y238 1755 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 VAV2P52735 878 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 TATDN1Q6P1N9 297 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 SYCP3Q8IZU3 236 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 TTYH3Q9C0H2 523 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 KCNMB3Q9NPA1 279 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 SIK3Q9Y2K2 1263 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 LY75O60449 1722 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 AP3B2Q13367 1082 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 WHAMMP3Q1A5X7 153 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 SLC9C1Q4G0N8 1177 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 NSMFQ6X4W1 530 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 NIM1KQ8IY84 436 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 RETREG2Q8NC44 543 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 ZNF577Q9BSK1 485 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 GLT8D2Q9H1C3 349 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 ARP10275 920 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 KCNMA1Q12791 1236 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 ORC2Q13416 577 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 LEKR1Q6ZMV7 388 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 COG1Q8WTW3 980 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 MKL1Q969V6 931 aa12.69□□□□□ -0.38
ARHGEF1-220ENST00000600274 TMEM150BA6NC51 233 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 EIF3CLB5ME19 914 aaKnown RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 SPATA31C1P0DKV0 1188 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 CAPN2P17655 700 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 POLD1P28340 1107 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 PSMD2Q13200 908 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 SF3B2Q13435 895 aaKnown RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 GIT2Q14161 759 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 COG2Q14746 738 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 ETNPPLQ8TBG4 499 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 MS4A14Q96JA4 679 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 EIF3CQ99613 913 aaKnown RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 PACSIN1Q9BY11 444 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 PCIF1Q9H4Z3 704 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 OPLAHO14841 1288 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 XRCC5P13010 732 aaKnown RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 EIF2AK2P19525 551 aaKnown RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 EHBP1Q8NDI1 1231 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 IPO4Q8TEX9 1081 aaKnown RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 MTMR8Q96EF0 704 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 ALS2CR12Q96Q35 445 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 PURBQ96QR8 312 aaKnown RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 WDR18Q9BV38 432 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 RAVER2Q9HCJ3 691 aaKnown RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 PLAGL2Q9UPG8 496 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 SMCHD1A6NHR9 2005 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 PDE2AO00408 941 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 USP8P40818 1118 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 SLC12A3P55017 1021 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 KIAA0753Q2KHM9 967 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 LDHDQ86WU2 507 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 CCDC170Q8IYT3 715 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 PROCA1Q8NCQ7 364 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 HOOK2Q96ED9 719 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 NAP1L4Q99733 375 aaKnown RBP12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 RSPH14Q9UHP6 348 aa12.68□□□□□ -0.38
ARHGEF1-220ENST00000600274 ENTPD3O75355 529 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 FOSP01100 380 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 ASIC2Q16515 512 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 MEA1Q16626 185 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 ODR4Q5SWX8 454 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 PDXDC1Q6P996 788 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 DHX37Q8IY37 1157 aaKnown RBP12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 SUPT20HQ8NEM7 779 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 SALL4Q9UJQ4 1053 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 MYO3BQ8WXR4 1341 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 ZRANB2O95218 330 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■■■□□ 15.3
ARHGEF1-220ENST00000600274 EGFRP00533 1210 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 TRIM49P0CI25 452 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 TRIM49CP0CI26 452 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 IBSPP21815 317 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 RPA1P27694 616 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 SREBF1P36956 1147 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 EHHADHQ08426 723 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 ARHGAP44Q17R89 818 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 GPATCH11Q8N954 259 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 LENG9Q96B70 501 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 GMCL1Q96IK5 515 aa12.67□□□□□ -0.38
ARHGEF1-220ENST00000600274 NFIBO00712 420 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 FLOT1O75955 427 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 AKAP3O75969 853 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 ZSCAN26Q16670 478 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 KNOP1Q1ED39 458 aaKnown RBP12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 CHURC1Q8WUH1 139 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 MYO1AQ9UBC5 1043 aa12.66□□□□□ -0.38
ARHGEF1-220ENST00000600274 CCDC151A5D8V7 595 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms